Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3228 ATGGAAACCGTTGACGCCTTCCTGACCTCCGGTGACCGCAATAAACCCAATACGTTTGAAATATGGGTTCAAAACCCAAAACCATGGAAAAACGTTGGGTACACTCTTTTCTGTGTCTCCGTTGTTGTTTTTGCAGTTGTCCTTCATCGGTTGAAAGGTCCAGCCAAGGTGTTACCTTATCGTCGCCAATTCAAAGCGTGTGGTGTATTCCTGGCCCTGTTGGTGATCTTTATCTACACCTTCTTTTCCAGAAGAGGGGAAGAACAAGAACAACAACGGAAAGGACACAATGATACACCAAATAACGTACAAGTTGCTGGTATAGTATCCCTTGTTGGTTTTGTTGTGATGGCTTTTGCTCTATCAATACAAACTAACTATGGATTTGTTGGAGAACTTATGAAATTCTTTTTAGAAGAACTTATGGTGGAGCTCATAAAGATAAGATGGTGGTACGGCTTCTTTGGAGCTCTCTTCAGTTTTCTCCTCATCATTCTCCATTCATGTAAAGAGAAACATGCCGAAGGAGATGTGCATCAAGATCCAATTGACAACAACACTACTCTCCTCCTAGATATTAGAACGGATTCTTTGTCTACTGTACGTCCAACTCAAGATCTCTTCACCCTTGCGCTACTAAATCTTAACAAGAAGGATTTGGAACTTTCCCAAAATTTACGGCGTCATTTGATTGGCTACATCAACTATTGGAGTGACCAGATTCCAGAGGGAATAATGCAAGACCAAAACTTCATTAAGGACAGGATTATGCGAGAAGTTGAGACTCTTCACTTAATAGTGAATCAGATGACATCAAGGGACAATTTTGAAATGGACAATTGGTTGCCGACAATGTACTTTAGAAGTCGAAAACAATTCCTGCGGAAGTGCGAATCCGAGCTGAAACCCGACAACTCGACGGCCCAGGTGAGTAGGATCAAGAATTGGATTAAATATTGCAACATAGTATTAAAGATACTAATTCCCAACGAACGGATACTCTGTCAACAAGTCTTTGGCGAATTCTCTCCCATCTCCAGCAAGTGTTTTGAGCAGCTTTGCTTACAAGTCAAACAAGATTTGCTCAGTTTCATTCAAGGTATCCCTGAACTGATGAGTCCTGAAATTGTCCTGGTGTTCAGAATAGTACGTGACTTAATTGTTCCAGAGTTCCGTTCACTGTTTACTCGTAATCTAGACATGACCATCGAAATGTTTGATCTCACAAAAAAACTAGGAGAAGCAACCAGAGATTACTATTTCAGGGATGACGATGTTCCTCCCGAAATTGAAAACTCTCATTCCTGTGAGCCTCATCCAATTACCATCTTATTGAATCGCCTCGATATTGCTTTCAAAGACAGGGACATCATTGAACCACTCCTCAAAACATACCCCAATTCCAAAGTTCAAGTTCGGGAGGAATGGTCTTTGATTTCACACTATATAGATTGGAATATCAACAAACTTGAGGCCTCCTTAGAATCCACGTTGAAGAAGACCTACATTTATGAATTGCAAGGAGTGTCTATCATGGCTAATGTTAACTACATATTAAAGAAGGCTTACGAATTTGGATTTGAATTAACTAAGAAAGATGGTTGGCTCAAAGAACAAGCGTCCAAAATTCAACAGTGCTTTGAACAATATTATCGGGAGAATCCGACTGAATTGTTGGCCTTTTTCAAGCAGCATAATGTGAGAGTCACGGAACATTCAATGAGGGAGATGCTAAGGTTGTTCAATTTTAACCATTTACTTGAGAAACAATCCTATAGTTATCAAGGAGAGCTAATACTTTTAGTGAACAAGGGATTTGTCCCAAATTGTGAAAATTTCCTTCACAGATTTCGTACTTTACTAAATGGCAATGAGGACACACACCAGACATATATACCAACTATTGAAGATGAAATTGAAGATGATGTTGCTTGGAGATAG 1941 0.3977 METVDAFLTSGDRNKPNTFEIWVQNPKPWKNVGYTLFCVSVVVFAVVLHRLKGPAKVLPYRRQFKACGVFLALLVIFIYTFFSRRGEEQEQQRKGHNDTPNNVQVAGIVSLVGFVVMAFALSIQTNYGFVGELMKFFLEELMVELIKIRWWYGFFGALFSFLLIILHSCKEKHAEGDVHQDPIDNNTTLLLDIRTDSLSTVRPTQDLFTLALLNLNKKDLELSQNLRRHLIGYINYWSDQIPEGIMQDQNFIKDRIMREVETLHLIVNQMTSRDNFEMDNWLPTMYFRSRKQFLRKCESELKPDNSTAQVSRIKNWIKYCNIVLKILIPNERILCQQVFGEFSPISSKCFEQLCLQVKQDLLSFIQGIPELMSPEIVLVFRIVRDLIVPEFRSLFTRNLDMTIEMFDLTKKLGEATRDYYFRDDDVPPEIENSHSCEPHPITILLNRLDIAFKDRDIIEPLLKTYPNSKVQVREEWSLISHYIDWNINKLEASLESTLKKTYIYELQGVSIMANVNYILKKAYEFGFELTKKDGWLKEQASKIQQCFEQYYRENPTELLAFFKQHNVRVTEHSMREMLRLFNFNHLLEKQSYSYQGELILLVNKGFVPNCENFLHRFRTLLNGNEDTHQTYIPTIEDEIEDDVAWR* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3228 646 SUPERFAMILY Cullin repeat-like 260 589 IPR016159 -
Amo16g3228 646 Gene3D Exocyst complex component Exo70 195 644 - -
Amo16g3228 646 PANTHER PROTEIN, PUTATIVE-RELATED 106 583 - -
Amo16g3228 646 PANTHER EXOCYST COMPLEX PROTEIN EXO70 106 583 IPR004140 GO:0000145|GO:0006887
Amo16g3228 646 Pfam Exo70 exocyst complex subunit 314 588 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3228 Amo-Chr16 137178928 137183476 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3228 313 641 EXO70 exocyst subunit family AT5G58430 28.177 2.80e-22 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3228 - K07195 ahf:112697185 1237.25