Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3222 ATTTTAAATACTTTAAAAAATTTTATAAACACTAAATTTAGTATATTACATATAAGTAACTTTTATTTTTGTAAAAAAATTGGTGTGTTGGAATCTGTGTTGGGTGCAGAAGCTGTTGCATACTTTGTTTCTGCGGTTTCCAATAATTTCTTCTCCAGCGTGGTTGCTTCTGCTTTGGCTTTGGCCAGAACTGATGCTGGCCTCCGGCGGCGGCTGTGCCAGGTTCTAGAGGGTTCCAAGTGGAATTATGCTATTTTTTGGCAGGTTGTTGGGCTAAAATCTGGTGGCTTCGCCTTGATTTGGGGCGACGGCCAATGCTGCGATCCCAAAGGGGGCGGAGCTGGCGAGGGAGGATCTGAAGGGAATTGGAGTGGAGTTAGTAAGGGTGATAAAGAGGAGCTGCGAAAGAAGGTGCTGCAGAAGCTTGATGCATACTTTGCTTGCTCTGTGTCGAAAGAGGTGAATTATGCAAGATTAGATATGGTTTCGGAGTTGCATATGTTTTACTTGGCCTCAAAGTATTATATATTTGGTTTCGATTCGCCTTGTGGCCTTGGTGGCTCTTTCAAGTCTGGCAAATCAATTTGGATTTTTGATTCTGCTAGCTGTTCAAACCAACTAGAATCAAGATCATTTCTTGGGAGACAGCTGGTCTTCAAACGGTTGTTTTTGTGCCTCTTAAAGCCGGAGTTGTTGAGCTTGGTTCCGTGGAAACAGTGCCAGAAGACCAGGGTGTTTTGGATTTGGTCAGGACAGCATTTGGTGCGAGTAAGTTGCCCCTTAGATCTCCACCCGATTTCCAGAGTCATTAAGACATTACAGGAGCATCAAATCATGGCTCCAGAGTCAGGTGTTTCAACATCGGAGGGAAAGATGATTCATACATTCTCCATAAGAGCGCAGGGCAGCAAGGCTGCTGCAATACAATTGAAGGAAAATCTTGAAGCATCCTTATCCAAAAACTGA 966 0.4369 ILNTLKNFINTKFSILHISNFYFCKKIGVLESVLGAEAVAYFVSAVSNNFFSSVVASALALARTDAGLRRRLCQVLEGSKWNYAIFWQVVGLKSGGFALIWGDGQCCDPKGGGAGEGGSEGNWSGVSKGDKEELRKKVLQKLDAYFACSVSKEVNYARLDMVSELHMFYLASKYYIFGFDSPCGLGGSFKSGKSIWIFDSASCSNQLESRSFLGRQLVFKRLFLCLLKPELLSLVPWKQCQKTRVFWIWSGQHLVRVSCPLDLHPISRVIKTLQEHQIMAPESGVSTSEGKMIHTFSIRAQGSKAAAIQLKENLEASLSKN* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3222 321 PANTHER MYC 253 320 IPR045084 GO:0003700|GO:0006355
Amo16g3222 321 PANTHER MYC 29 232 IPR045084 GO:0003700|GO:0006355
Amo16g3222 321 PANTHER TRANSCRIPTION FACTOR BHLH3 29 232 - -
Amo16g3222 321 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 68 217 IPR025610 -
Amo16g3222 321 PANTHER TRANSCRIPTION FACTOR BHLH3 253 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3222 Amo-Chr16 137009765 137012194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3222 254 320 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 49.254 1.53e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3222 - - aip:107648408 418.313