Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3208 ATGGAAACTTGTACGGCTCTTCTGCTTTTAACGGCGGTCATTGCTTACCAGCTTTGGCTAACTTTCATCTCACGGTCACTGAAGGGTCCACGTGTCTGGCCTCTATTGGGCAGTCTCCCGGGGCTGATCGAGAATTGTGACCGTATGCATGACTGGATCTCTGATAACCTCCGCGCGTGTGGCGGCACGTACCAGACATGCATCTGTGCAATCCCCTTCCTTGCTAAGAAGCAGGGTCTCGTGACTGTCACGTGCGACCCGAGGAACTTGGAGCACATTCTCAAGACCCGATTCGATAATTACCCGAAAGGGCCCACGTGGCATGCTGTGTTTCATGATCTACTTGGTGATGGAATCTTCAACTCTGATGGTGACACGTGGCTTTTCCAGCGTAAGACGGCTGCATTGGAATTCACCACCCGGACGCTCCGACAAGCCATGGCCCGGTGGGTGACCCGAGCCATCAAGGAACGGCTTTGCTTGATCCTCAAGAAAGCCGAGGAGGAAGCCGGGTCGGTCGATTTGCAAGATCTAATGCTTCGGCTCACTTTTGACAACATTTGCGGCTTGGCTTTTGGGAGGGACCCACAAACTTGTGGCCTAGGCTTGCCGGAGAATAATTTTGCCACTGCTTTCGACCGAGCCACCGAGGCTTCGCTTCAGAGGTTCATATTGCCGGAGGTGCTGTGGAAGYTCAAGAAATGGCTTCGGCTTGGAATGGAAGTCAGCTTGAGCCGAAGCCTTGTTGACGTGGACAAGCATTTATCTAATGTCATRGAAAAGCGCAAAGTGGAATTATTAAGCCACCAAAAGGATGGGACCCACCATGATGATTTGCTGACTAGGTTTATGAGGAAAAAAGAATCCTACTCGGATCAATTTCTCCAACACGTGGCATTGAATTTCATCCTAGCTGGACGTGACACGTCATCAGTCGCATTGAGTTGGTTTTTCTGGTTGGTGATTCAGAATCCAAGTGTGGAAACAAAAATTTTGCGCGAAATATGCACCGTTCTGATTGAGACACGTGGCAGTGACGTGGAAAAGTGGGTTGAGGAACCGTTGGTGTTTGASGAAATTGATCGTTTGGTTTATCTAAAAGCAGCATTGTCCGAGACACTAAGGTTGTATCCTTCGGTGCCGGAGGATTCGAAGCACGTGGTCGCCGATGATGTGTTGCCGGATGGCACGTTRGTTCCGGCCGGATCATCGGTGACWTATTCGATATACTCGGCAGGGAGGTTGAAGTCCACGTGGGGCGAAGATTGCATGGAATTTCGCCCTGAGAGGTGGTTGTCTCAGGATGGAACAAAATTCATCATGCARGACTCTTTCAAGTTTGTTGCTTTCAATGCTGGTCCAAGAATATGCTTAGGAAAGGATTTGGCATACCTACAGATGAAGTCYGTTGCGGCCGCCGTGCTCCTCCGCCACCGGCTCACATTGGTGCCTGGCCACCAGGTTGAGCAGAAGATGTCACTCACATTGTTCATGAAAAATGGACTCAAGGTCAATGTTCATAGCAGGGACTTGAAAGGTTTTGTGGCAAGTTTTCTGAAAGAAAGGGTAGCAGATAATAATGGTAAAGAATCTGCAGGTTTGAGAAGTAATGGTTGTTAA 1620 0.492 METCTALLLLTAVIAYQLWLTFISRSLKGPRVWPLLGSLPGLIENCDRMHDWISDNLRACGGTYQTCICAIPFLAKKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWHAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVTRAIKERLCLILKKAEEEAGSVDLQDLMLRLTFDNICGLAFGRDPQTCGLGLPENNFATAFDRATEASLQRFILPEVLWKXKKWLRLGMEVSLSRSLVDVDKHLSNVXEKRKVELLSHQKDGTHHDDLLTRFMRKKESYSDQFLQHVALNFILAGRDTSSVALSWFFWLVIQNPSVETKILREICTVLIETRGSDVEKWVEEPLVFXEIDRLVYLKAALSETLRLYPSVPEDSKHVVADDVLPDGTLVPAGSSVTYSIYSAGRLKSTWGEDCMEFRPERWLSQDGTKFIMQDSFKFVAFNAGPRICLGKDLAYLQMKSVAAAVLLRHRLTLVPGHQVEQKMSLTLFMKNGLKVNVHSRDLKGFVASFLKERVADNNGKESAGLRSNGC* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3208 539 Gene3D Cytochrome P450 24 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3208 539 PANTHER CYTOCHROME P450 4 511 - -
Amo16g3208 539 PANTHER CYTOCHROME P450 86A7 4 511 - -
Amo16g3208 539 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3208 539 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3208 539 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3208 539 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3208 539 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3208 539 Pfam Cytochrome P450 28 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3208 539 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3208 539 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3208 539 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3208 539 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3208 539 SUPERFAMILY Cytochrome P450 27 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3208 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3208 Amo-Chr16 136779363 136781520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3208 1 516 Cytochrome P450 AT2G45970 78.723 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3208 K15398 - gmx:100779986 952.97