Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3207 ATGATTTTCAAGACACTAGAAGAAGCTGGAAAGTTCTACAAAAATTATTCCAAACTTGCCGGTTTTTCTACGAAAATAAGGAACACGACTCGGGATGGAGACAAGATTAAGAATCAACTAATTGTATGCATCAGAGAGGGGAGGTGGAAATCAAAGATATATCCAACTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTCCGACCAGAATTTACGTACACATAATGAAGGATGTTAGTCTTTGGACAATTTTCAAAGTTGTTTTGAATCACTCACATCCTTGTTGTCCAGACCAGGCTGAGATGCTCAAACAACACAAGGAGCTTAGCATGTTTGTGCGTCGCACCATCGAAACCTACGAGGAAGCCAGAATCAGATCGAGCAAAACTTACCAATCATTTGTGGCAGCAGCTGGCAGTCACCGTGAACTAGCAGCTGTACGAGGATCAGTATATATGGATTTCAGTTTACTTGGATCACCACTTCTGAGCCGGGATGAGAAGCACACAAAGGAGGTTTCCAACTCCATATTCAACAAGTTTATCGTCACCTACGATGCAGTATCACGAGATGTAAAGTGCCATTGCTTGCTGTTTGAGTCTAGGGGCATATTGTGCCGCCATTCCCTAAGCGTCCTAAGCTTTGAGCGAGTGGATAACGTGGCACCGAAATACATATTGGAACGTTGGAGCAAGAACATAAAGAAGAGGCATACACACATTAAGAGCAGCCAAGATGAACTTCTACTGGAGCCGAGAAGTAAGAGATTTGACAAATTGGTGTTTCGGTCATACAATATATGCGATTTTGCATCTGAGTCTGAATAG 828 0.4239 MIFKTLEEAGKFYKNYSKLAGFSTKIRNTTRDGDKIKNQLIVCIREGRWKSKIYPTLKTNPSAGLNCPTRIYVHIMKDVSLWTIFKVVLNHSHPCCPDQAEMLKQHKELSMFVRRTIETYEEARIRSSKTYQSFVAAAGSHRELAAVRGSVYMDFSLLGSPLLSRDEKHTKEVSNSIFNKFIVTYDAVSRDVKCHCLLFESRGILCRHSLSVLSFERVDNVAPKYILERWSKNIKKRHTHIKSSQDELLLEPRSKRFDKLVFRSYNICDFASESE* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3207 275 PANTHER OS03G0843700 PROTEIN 1 117 - -
Amo16g3207 275 PANTHER OS03G0843700 PROTEIN 165 251 - -
Amo16g3207 275 SMART 26again6 192 219 IPR006564 GO:0008270
Amo16g3207 275 ProSiteProfiles Zinc finger SWIM-type profile. 181 217 IPR007527 GO:0008270
Amo16g3207 275 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 117 IPR031052 GO:0006355
Amo16g3207 275 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 165 251 IPR031052 GO:0006355
Amo16g3207 275 Pfam FAR1 DNA-binding domain 11 96 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3207 Amo-Chr16 136732219 136734122 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g3207 FAR1 7e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3207 - - aip:107614666 265.774