Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo16g3171 | ATGACGGTGTTTTCCGGCAGCAGACAAGTGTTTCCGATTGACTTCGAGGCGGAGGTCTCGCAGCGCCTTCTAGAAGCTTCTAACTCCGGCGATCTGACCTCCGCGCTCTACTGCATCGCTGATCCCTCCGTCGACGTCAACTTTGCCGGCGCCGTCACGCTCAGGACTCGCCACGCGGACCTCGTCCCTTTGCCGGAATCCGCTAGCCAGGTCCGCGTTGAGTTCCACGACTTCGTCACCGACGTCACGCCGCTCTTCCTCGCCGTACACTCAGGGAACGCCACACTCGTCAGGAAGTTACTGGGTAAGGGAGCTGATGTAAACCAGAAGCTCTTCAGGGGCTTTGCAACGACTGCAGCAGTAAAGGAAGGCCATATTAGTATCCTTGAGATGTTACTGAAAGCAGGGGCATCACAACCAGCATGTGAAGAAGCTCTTGTTGAGGCAAGCTGCCATGGGCAAGCAGGGTATGCTGAGTTACTCATGAGCACTGATTTGATCAGACCGCACGTTGCTGTTCATGCTCTTGTGACCGCATGCTGTAGAGGATTCGTTGATGTGATTAGGATGCTTATAAAGCGCGGTGTGGATGTCAATGCAACAGACCGGGTGCTTTTGCAGTCACTTAAGCCTTCTCTTCATGCAAATGTGGACTGTACTGCGCTTGTCGCAGCTGTAATTCACAGGCAGCTCCCTGTTGTGGATTTGCTACTGAAGAATGGTGCTAGGATAGACTCTGAGGTGAGGCTTGGAGCATGGTCATGGGACATTTCAACTGGTGAAGAGCTTCGTGTCGGTGCTGGTCTGGGAGAACCATATGACATTGCCTGGTGTGCAGTTGAGTATTTTGAAAGGAGTGGTGCCATATTGCGGTTGATCCTACAACATATCTCCTCCAAGAATCCTCACCATGGAAGAACCCTTCTGCACCATGCCGTCCTTTGCGGCAATGATGAAGCCGTCAGAGCACTCTTAGAATTCGGTGATAGCGTGGAATCTCCAGTCAAAACAACCAACAAGGCTGAGTTCCTTCCTTTACACATGGCATCCCGACTTGGCTTTCCAACAATCATTCAATGCCTTATTGATTTTGGTTGTGATTTGAACTCAATAACAGACTCAGGTGACACAGCTTTGATGATCTGTGCAAAATATAAACAAGAGGAGTGTCTCAAAGTACTAACAAGGGCAGGTGCTGATTTTGGTTTGGTGAATGTTTCTGGTCAATCTGCATGTTCAATTGCAGAGGCAAACAAGTGGTCACATGGTTTTCAACAGGCATTGCTAGATACAATCCGAAAAGGCAAGATACCAAAATCCGGCAATGTTTCTGTGTTTTCGCCGTTATTGTTCACAGCTCAAGCTGGGGATGCGGAAGCACTGAAAACTCTAGTTGAATCTGGAGAGTTTGATCTTGACTATCAAGATGAGAGAGGCTTCTCTGCAGTTATGGTTACTGCTCTAAATGGCCATGCTGAATCATTTCGGTTGCTTGTATATGCTGGTGCTGATGTGAAGTTATGCAATAAATATGGTGAAACAGCAATAACTCTATCTAAACTGAATCAGAACTGTGATCTATTTGAACAGGTCATGCTTGAATTTGCAATTGAAAAGGGCAATCGCAATGCCTGTGGCTTCTACGCTTTACATTGTGCAGCTCGTCGTGGCGACTTGGATGCTGTCAAATTGCTCACAAACAAAGGCTATGATGTGAATGTCCCTGATGGGGAGGACTACACTCCTCTTATGTTAGCAGCAAGGGAAGGCCATGCATCCATTTGCAAACTTCTGATTTCGTGCGGTGCTCATTGCAATGCTAAGAATTCTAGAGGGGAAACTCCACTTCTATTTGCAAGGAAATCTTCAGGAGGGTGTAAAAATGAAGCACAGGCCGTTATTCTAGACGAATTAGCGCGAAAACTGGTGCTACATGGCTCCTATGTATTGAAGCACACAAAATGCGGGAAGGGCTCCCCACATGGGAAACAAATAAGGATGTTAGGATCTGCAGGTGTTCTTTGTTGGGGGAAATCAAGCAGCAGAAACGTGATCTGCCGTGAGGCAGAGTTAGGGGCAAGTTCGACATTACGTAGAAACAGGTACAAGAAAGGTGATGCAGATGAACCTGGAATGTTTAGAGTGCTCACGAACAAGAACAAGGAAGTGCATTTTGTATGTGATGGGGGTTTAGAAGTTGCTGAGCTTTGGGTCAGAGGTATAAAACTTGTAACGAAAGAGGTTTATTTTGTTAAGGGATCCATCTCATAA | 2271 | 0.472 | MTVFSGSRQVFPIDFEAEVSQRLLEASNSGDLTSALYCIADPSVDVNFAGAVTLRTRHADLVPLPESASQVRVEFHDFVTDVTPLFLAVHSGNATLVRKLLGKGADVNQKLFRGFATTAAVKEGHISILEMLLKAGASQPACEEALVEASCHGQAGYAELLMSTDLIRPHVAVHALVTACCRGFVDVIRMLIKRGVDVNATDRVLLQSLKPSLHANVDCTALVAAVIHRQLPVVDLLLKNGARIDSEVRLGAWSWDISTGEELRVGAGLGEPYDIAWCAVEYFERSGAILRLILQHISSKNPHHGRTLLHHAVLCGNDEAVRALLEFGDSVESPVKTTNKAEFLPLHMASRLGFPTIIQCLIDFGCDLNSITDSGDTALMICAKYKQEECLKVLTRAGADFGLVNVSGQSACSIAEANKWSHGFQQALLDTIRKGKIPKSGNVSVFSPLLFTAQAGDAEALKTLVESGEFDLDYQDERGFSAVMVTALNGHAESFRLLVYAGADVKLCNKYGETAITLSKLNQNCDLFEQVMLEFAIEKGNRNACGFYALHCAARRGDLDAVKLLTNKGYDVNVPDGEDYTPLMLAAREGHASICKLLISCGAHCNAKNSRGETPLLFARKSSGGCKNEAQAVILDELARKLVLHGSYVLKHTKCGKGSPHGKQIRMLGSAGVLCWGKSSSRNVICREAELGASSTLRRNRYKKGDADEPGMFRVLTNKNKEVHFVCDGGLEVAELWVRGIKLVTKEVYFVKGSIS* | 757 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo16g3171 | 756 | Gene3D | - | 533 | 633 | IPR036770 | - | |
Amo16g3171 | 756 | ProSiteProfiles | Ankyrin repeat profile. | 545 | 577 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | Pfam | Ankyrin repeats (3 copies) | 288 | 370 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | Pfam | Ankyrin repeats (3 copies) | 526 | 609 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | Pfam | Ankyrin repeats (3 copies) | 85 | 202 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | ProSiteProfiles | Ankyrin repeat region circular profile. | 80 | 108 | - | - | |
Amo16g3171 | 756 | ProSiteProfiles | Ankyrin repeat region circular profile. | 545 | 576 | - | - | |
Amo16g3171 | 756 | PANTHER | ANKYRIN REPEAT-CONTAINING | 6 | 750 | - | - | |
Amo16g3171 | 756 | ProSiteProfiles | Ankyrin repeat profile. | 80 | 112 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | PANTHER | ANKYRIN DOMAIN PROTEIN | 6 | 750 | - | - | |
Amo16g3171 | 756 | SMART | ANK_2a | 171 | 200 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | SMART | ANK_2a | 304 | 333 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | SMART | ANK_2a | 478 | 507 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | SMART | ANK_2a | 444 | 474 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | SMART | ANK_2a | 578 | 607 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | SMART | ANK_2a | 111 | 141 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | SMART | ANK_2a | 341 | 370 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | SMART | ANK_2a | 374 | 403 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | SMART | ANK_2a | 80 | 109 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | SMART | ANK_2a | 545 | 574 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | SMART | ANK_2a | 217 | 246 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | ProSiteProfiles | Ankyrin repeat profile. | 578 | 610 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | Gene3D | - | 429 | 532 | IPR036770 | - | |
Amo16g3171 | 756 | Gene3D | - | 289 | 428 | IPR036770 | - | |
Amo16g3171 | 756 | Gene3D | - | 142 | 260 | IPR036770 | - | |
Amo16g3171 | 756 | SUPERFAMILY | Ankyrin repeat | 300 | 620 | IPR036770 | - | |
Amo16g3171 | 756 | ProSiteProfiles | Ankyrin repeat profile. | 304 | 336 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | ProSiteProfiles | Ankyrin repeat region circular profile. | 578 | 609 | - | - | |
Amo16g3171 | 756 | Gene3D | - | 12 | 141 | IPR036770 | - | |
Amo16g3171 | 756 | ProSiteProfiles | Ankyrin repeat region circular profile. | 304 | 332 | - | - | |
Amo16g3171 | 756 | ProSiteProfiles | Ankyrin repeat profile. | 341 | 373 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | ProSiteProfiles | Ankyrin repeat profile. | 374 | 406 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | ProSiteProfiles | Ankyrin repeat profile. | 175 | 203 | IPR002110 | GO:0005515 | |
Amo16g3171 | 756 | SUPERFAMILY | Ankyrin repeat | 61 | 246 | IPR036770 | - | |
Amo16g3171 | 756 | ProSiteProfiles | Ankyrin repeat profile. | 478 | 510 | IPR002110 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo16g3171 | Amo-Chr16 | 135829481 | 135836149 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo16g3171 | 449 | 615 | Ion Channels | AT2G25600 | 28.743 | 6.83e-08 | 54.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo16g3171 | - | - | adu:107494823 | 1251.5 |