Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3146 ATGTGTATGCTTGCGTGGAAACTTTTCCTACCAGAGGAGGAATTTGGTTTGGACCATCCAGCCGCWAATCCCTTAATCTCGGGACGAGGTCCTCCTTTAAAGCTAATGCCTCCAACATTGACAGTGGTGGCAGAACARGACTGGATGAGAGATCGRGCCATTGCTTACTCAGAGGAGCTCCGGAAGGTGAATGTTGATGCACCTGTGCTTGAATACAAGGATGCAGTGCATGAATTTGCGACACTRGATGTACTTATTAAAAGCCCTCAGGCCCAGGTTTGTGCTGAGGACATTGCTATCTGGGTCAAGAAGTATATTTCACGTAGAGGTCATGAATTCTCTTACTGA 348 0.4626 MCMLAWKLFLPEEEFGLDHPAANPLISGRGPPLKLMPPTLTVVAEQDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLIKSPQAQVCAEDIAIWVKKYISRRGHEFSY* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3146 115 Gene3D alpha/beta hydrolase 1 112 IPR029058 -
Amo16g3146 115 Pfam alpha/beta hydrolase fold 2 80 IPR013094 GO:0016787
Amo16g3146 115 PANTHER ARYLACETAMIDE DEACETYLASE 3 96 - -
Amo16g3146 115 PANTHER CARBOXYLESTERASE 16-RELATED 3 96 - -
Amo16g3146 115 SUPERFAMILY alpha/beta-Hydrolases 2 106 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3146 Amo-Chr16 135372918 135373918 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3146 1 115 Carbohydrate Esterase AT3G27320 86.087 6.62e-71 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3146 - - adu:107494848 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3146 16 135372918 135373918 Amo16g3146 16 135372918 135373918 ECH