Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3143 ATGCCAAGTGTGGCTGTGAAGCTCTACAGCGTCTTCTTCAAGTTCCTCTTGAAGCACCGTTTACAGAACCGGATTCAGGCACCGCCCGAACACTACGACGCCTTTGGAGTTACCACCCGACCCGAAGAGTCCGTCGCCGCCGCCAACCCTTCTTTCACCGACGGCGTCGCTACCAAGGACATCCACATCGACCCGTTCACTTCCCTCTCTATCCGAATCTTCCTTCCCGAATCGGCACTGACTCCTCCCGACCCTCGTTCCAACCCTAACCACAACAACGCTGCTCGCAAACCTAGGTCCGATCATGGATCTGCATCCACGCGCGACTCGAACTCTCTTCCATCGCGCCGCAACAGCTATGAACCCTCCACTGTTATGCACAGGGAGGAATCGATGCGAAGGAACAGTGCCGGAAACGGCGTGGTTGAGGGTTTGAACTTGATGTCCAACGGCGTTTACCGGGGATACTCGCCGGCAGGGGACAATCGGCGGAAACTTCCGGTGATGCTGCAGTTCCACGGCGGCGGTTGGGTCAGCGGGAGTAATGATTCTGTTGCCAACGATATGTTCTGTCGGCGGATCGCGAAGCTCTGCGATGTGATCGTGGTGGCTGTTGGGTACAGGCTGGCGCCGGAGAATCGGTATCCGGCGGCGTTTGAGGACGGGATGAAAGTGATGACTTGGTTAGCCAAGCAGGCGAATTTAGCGGAATGCAGCAAGTCGATGGGGGTTGGGAAGGTTGGTAGTGGAGGAGGGATTGGTGGTGTCGGCGGCGGTGTTGGTGGGATTGAGTTCAAGAAACCAGATGCTCATAGGCATATAGTTGATTCATTTGGAGCTTCCATTGTTGAGCCGTGGTTGGCTGCTCATGGAGATCCATCAAGGTGTATTCTTCTTGGCGCAAGTTGTGGTGCAAATATTGCAGACTATGTGACTCGAAAAGCTGTGGAAGGAGGCAAACTTCTGGACCCAGTCAAGGTGGTAGCACAGGTCTTGCTGTATCCATTTTTCGTTGGAAGTGTGCCCACACATTCTGAAATAAAGTTAGCAAACTCCTACTTTTATGACAAACCTATGTGTATGCTTGCGTGGAAACTTTTCCTACCAGAGGAGGAATTTGGTTTGGACCATCCAGCCGCTAATCCCTTAATCTCGGGACGAGGTCCTCCTTTAAAGCTAATGCCTCCAACATTGACAGTGGTGGCAGAACACGACTGGATGAGAGATCGTGCCATTGCTTACTCAGAGGAGCTCCGGAAGGTGAATGTTGATGCACCTGTGCTTGAATACAAGGATGCAGTGCATGAATTTGCGACACTCGATGTACTTATTAAAAGCCCTCAGGCCCAGGTTTGTGCTGAGGACATTGCTATCTGGGTCAAGAAGTATATTTCACGTAGAGGTCATGAATTCTCTTACTGA 1422 0.5218 MPSVAVKLYSVFFKFLLKHRLQNRIQAPPEHYDAFGVTTRPEESVAAANPSFTDGVATKDIHIDPFTSLSIRIFLPESALTPPDPRSNPNHNNAARKPRSDHGSASTRDSNSLPSRRNSYEPSTVMHREESMRRNSAGNGVVEGLNLMSNGVYRGYSPAGDNRRKLPVMLQFHGGGWVSGSNDSVANDMFCRRIAKLCDVIVVAVGYRLAPENRYPAAFEDGMKVMTWLAKQANLAECSKSMGVGKVGSGGGIGGVGGGVGGIEFKKPDAHRHIVDSFGASIVEPWLAAHGDPSRCILLGASCGANIADYVTRKAVEGGKLLDPVKVVAQVLLYPFFVGSVPTHSEIKLANSYFYDKPMCMLAWKLFLPEEEFGLDHPAANPLISGRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLIKSPQAQVCAEDIAIWVKKYISRRGHEFSY* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3143 473 MobiDBLite consensus disorder prediction 79 135 - -
Amo16g3143 473 SUPERFAMILY alpha/beta-Hydrolases 154 459 IPR029058 -
Amo16g3143 473 Pfam alpha/beta hydrolase fold 169 438 IPR013094 GO:0016787
Amo16g3143 473 PANTHER ARYLACETAMIDE DEACETYLASE 21 453 - -
Amo16g3143 473 PANTHER CARBOXYLESTERASE 16-RELATED 21 453 - -
Amo16g3143 473 Gene3D alpha/beta hydrolase 36 470 IPR029058 -
Amo16g3143 473 MobiDBLite consensus disorder prediction 105 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3143 Amo-Chr16 134874966 134878635 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3143 1 473 Carbohydrate Esterase AT3G27320 70.440 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3143 - - adu:107494848 925.62