Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3137 ATGGTGGGAGGCTTAGATGTTTTGCCACGAGAATTGGTGTCCAAAATCCTCTCAAGGTTACCGGTGAAGCTTCTTCTCCGATGCAAGTGCGTGTGCAAGTCATGGTTCGATATCATAACAGATCCTCATTTCGCGACCAATCACTACGTTGTCTACAACAACATGGAAGAAGTAGAAGAAGAAGAACTCTTGGTGATTCGAAGACCCTTTCTTTCTGGTCTCAAAACTTATATCTCTCTTCTTTCTTGGGACCCCAAAGAACCCAAAGGCTCTGTTTCTTCTGAAATTCTGAACCCTCCTTATGATTACGACTCTGATCATAAATACTGGACCGAAATCATGGGTCCTTGCAATGGCATATACTTCTTAGAGGGGAACCCGAATGTGATGATGAACCCTTCTCTGAGAGAGTTCAAGGCTTTGCCTGAATCTCAATTCACAACTCCACGTGGCACTTATTCCTTCACTGATTACTCTGGGTTCGGGTTTGATCCAAAAACTAACGACTTCAAAGTTGTTGTGATCAAGGACCTTTGGTTGAAGGAAACAGATGAGAGAAAACCAGGGTACTGGACAGCTGAATTGTTCAGCCTCAACTCAAATTCATGGCGAAAACTTGAAGATGATGCTGTTCTTCCTCTCCCGTTTGAGATTTGGGGTTCTTCTCGTGTTTACACTTACGTCAACCATTGTTGCCACTGGTGGAGCTATGTTAGCAACAGCGTTGACCGAAGAAAGATGCAGTCAACGCGAGATCTTGTTCTAGCATTCAACCATGTCAATGAGTGTTTCAGGAAGATCGAGTTACCGAGAATAAGGTACTCTCGCGAAGAAGAGTTTGCGACTCTGGTACCCTTTGAAGGTACCATTGGCGTTATTGTTTACCCTGTGAGGGGAACAGAGAAGGTTCTAGATGTATGGGTAATGAAGGATTATTGGAACGATGAATCTTGGGTTAAGCTATACAGTGTTGGACCTGTGATGGTGGTTTACAAGCTTGTTGGGTTTTATGGGAGTGACAGGTTTCTTTGGAAGGATAGCAATGAGAGATTGGTGATGTATGGATCTGAATCGAAGGAAATGAGGGATCTTGAGGTTTATGGAAAGTATGATTCGTTAAGAGCTGCTAGGTATACTCAAAGCCTTGTTTCACTTCATAGAGGGAACGAGTTTCCTCACCAATTTGTTTCTTGTTGTTTGGTTCCGGATCCTCTGCTCAATCAAACTGACACGGACCTCATTTCCTTTTTGTAA 1254 0.433 MVGGLDVLPRELVSKILSRLPVKLLLRCKCVCKSWFDIITDPHFATNHYVVYNNMEEVEEEELLVIRRPFLSGLKTYISLLSWDPKEPKGSVSSEILNPPYDYDSDHKYWTEIMGPCNGIYFLEGNPNVMMNPSLREFKALPESQFTTPRGTYSFTDYSGFGFDPKTNDFKVVVIKDLWLKETDERKPGYWTAELFSLNSNSWRKLEDDAVLPLPFEIWGSSRVYTYVNHCCHWWSYVSNSVDRRKMQSTRDLVLAFNHVNECFRKIELPRIRYSREEEFATLVPFEGTIGVIVYPVRGTEKVLDVWVMKDYWNDESWVKLYSVGPVMVVYKLVGFYGSDRFLWKDSNERLVMYGSESKEMRDLEVYGKYDSLRAARYTQSLVSLHRGNEFPHQFVSCCLVPDPLLNQTDTDLISFL* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3137 417 Gene3D - 4 47 - -
Amo16g3137 417 ProSiteProfiles F-box domain profile. 2 55 IPR001810 GO:0005515
Amo16g3137 417 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 6 411 - -
Amo16g3137 417 TIGRFAM F_box_assoc_1: F-box protein interaction domain 114 339 IPR017451 -
Amo16g3137 417 SMART fbox_2 8 48 IPR001810 GO:0005515
Amo16g3137 417 PANTHER OS09G0372900 PROTEIN-RELATED 6 411 - -
Amo16g3137 417 Pfam F-box-like 7 42 IPR001810 GO:0005515
Amo16g3137 417 SUPERFAMILY F-box domain 4 54 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3137 Amo-Chr16 134668403 134670201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3137 - - aip:107605056 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0791 19 12438864 12473088 Amo16g3137 16 134668403 134670201 PCT
Amo02g0096 02 1098215 1110161 Amo16g3137 16 134668403 134670201 PCT