Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3125 AGGATGGGGTTCTTGACATTCTTGAAGAGCAAGAAGAAAAAGATTGATGAAATGATGTTGAGGAATCGAATCAACCGTATCGAGCGTGTAGCTAGGCAGCTAGTTGAGCATGGAACACAAGAGTCTTCACCTGCAGCTAGTTTCAGTGTTTCTGCTCCCCCGCCTGGTAGCGAAGTAGAACAAGATGGCTCGGCCTCAGTTACACATGAACAACAACAACCAAAGCGTCAACAAGGATCAATGAAGGAGCACTTTCCAACAAATCCACAACCCGTTCCGCTTCCATGTCCTCCTCCTCAGCATGCTTCTGGATCTTCGCTGCTTTCGCATAGCGCTTCGCTTCGATACTTCCTTTACGACGAAATCGCAGCTGCTTGCGACAATTTCTCTTCCGATCGATGTGTGTCGGACACACACTGTGTTTTGTCAAGCAGTTACAAAGCTTCCTTTGCTGATGATTCTTCAAGGAAGCTCCAAGCTACTGGCTTGAAGGAATTCATTAATGAAGTCAATACTCTTGCATCTTTGCAACATCCAAACATTTGTAGGTTGCTTGGATTTCATGCACGTGACAGCTCAGAACCGAGGATGTTGGTGTATGAAAGGCTACACCTTGGAAGCTTGGATCGCTTGCTTTTTTACGGTACATCTGATTACCCAACTCTCGATTGGAATTCAAGATTGAAAATTGCCATTTGTGCTGCACAAGGTCTTACTTTCTTGCATGATGAAGGGCCCTTCCAGGCAATGTACAACGAATTTTCAACAGCCAACATACAGGTTGAAAAGGATTTCAGTGCAAAGCTTTCAGGGTATGGTTGCGTAGTCGGGCGAGTTTCAGAGGAAGCTATTAGAAACATGTCAATGGAAACATTCGAAAGAGGAATACTTACTCCGAAGAGCAATGTATGGAGTTTTGGAATCATTCTTCTGGAGCTACTTACCGGTATAAGGAATGTGGATAGCCGCCATCCAAATGTAGACAAGAACATAGTCAAGTGGAGCTGGCCATTCCTAAACGATGAATTCCGACTATCCATGATCATGGATCCTAAGCTGAAAGGCCACTATCCTCTAAGAGCAGCGAGGATGTTGGCTGACGTTGCGCACCGATGTCTCCAGAAGGAGCCATCGATACGGCCGACCATGCGAACTGTTGTTAAGCATCTTAAGATGATACAAGAGATGAAGTTCTCACCCCAAGAGCTAGTAACAATCCCTCTTGGAAAAAGTGTCCCTCTACCGCCACCACCGGAAGCTAGGCCTAGATTGAGTGTCTTTCCGCCATCACAGCCGACAAGTAAGCCTATACTGAGTTTCAATTCGTCATCTCCATCCGATGCCCCCAAGCAACATGTTTCGCCTCCTAAATGGTCTGACGTGCCCCCCACGCTTTCCACACACCCTTGGCCTTCCATACAATTTATGGAGAAGGTTGTTAGGCAAGAAACCAGGCATGGCCAATCATCATCCTAA 1476 0.4621 RMGFLTFLKSKKKKIDEMMLRNRINRIERVARQLVEHGTQESSPAASFSVSAPPPGSEVEQDGSASVTHEQQQPKRQQGSMKEHFPTNPQPVPLPCPPPQHASGSSLLSHSASLRYFLYDEIAAACDNFSSDRCVSDTHCVLSSSYKASFADDSSRKLQATGLKEFINEVNTLASLQHPNICRLLGFHARDSSEPRMLVYERLHLGSLDRLLFYGTSDYPTLDWNSRLKIAICAAQGLTFLHDEGPFQAMYNEFSTANIQVEKDFSAKLSGYGCVVGRVSEEAIRNMSMETFERGILTPKSNVWSFGIILLELLTGIRNVDSRHPNVDKNIVKWSWPFLNDEFRLSMIMDPKLKGHYPLRAARMLADVAHRCLQKEPSIRPTMRTVVKHLKMIQEMKFSPQELVTIPLGKSVPLPPPPEARPRLSVFPPSQPTSKPILSFNSSSPSDAPKQHVSPPKWSDVPPTLSTHPWPSIQFMEKVVRQETRHGQSSS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3125 491 SUPERFAMILY Protein kinase-like (PK-like) 159 393 IPR011009 -
Amo16g3125 491 MobiDBLite consensus disorder prediction 61 85 - -
Amo16g3125 491 PANTHER OS01G0588500 PROTEIN-RELATED 97 490 - -
Amo16g3125 491 MobiDBLite consensus disorder prediction 427 450 - -
Amo16g3125 491 Pfam Protein tyrosine and serine/threonine kinase 161 390 IPR001245 GO:0004672|GO:0006468
Amo16g3125 491 ProSiteProfiles Protein kinase domain profile. 1 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g3125 491 Gene3D Transferase(Phosphotransferase) domain 1 204 404 - -
Amo16g3125 491 Gene3D Phosphorylase Kinase; domain 1 100 201 - -
Amo16g3125 491 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 97 490 - -
Amo16g3125 491 MobiDBLite consensus disorder prediction 414 470 - -
Amo16g3125 491 MobiDBLite consensus disorder prediction 36 50 - -
Amo16g3125 491 MobiDBLite consensus disorder prediction 32 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3125 Amo-Chr16 134324855 134328744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3125 108 396 Receptor kinase-like Gene Family AT4G02010 34.426 5.51e-48 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Amo16g3125 PK_Tyr_Ser-Thr 4.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3125 - - adu:107494894 566.229