Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3103 ATGGATTTGACTCAAAATTCCCAAACCGTAGTTGCAATTGGACTCTTTTGTGTGATCATCACCACGCTTTGCTGCTTCTTCTTTTTTCATCGCTCCAAAGCTTCTCAAACGAGAAGAAGAGAACCCCCTATGGTTGACGGTGCATGGCCTTTACTCGGTCACCTCCCATTACTGAGCGGTTCCAAAGCAACTCACCATCTCTTCGGTTCCATCGCTGACAAGTACGGACCCCTTTTCACCATCAAAATCGGTCACCCCCGAGTACTAGTCATCAACAACTCAGAAACCGCAAAAGAGTGTTTCACCACAAACGATTTGGCCGTGTCATATCGTCCCAATCTCGTTGCCGTTGAAACCATGACATACAACCACGCCATGTTTGGGTTCGCACCTTACGGTCCCTATTGGCGCGAGATTCGGAAAATCGTCACTCTAGGGTTCCTTTCAAATTACCAAATTGACCTTCTCAGTCATGTCCGCGTCTCTGAAGTCCAGACATCGATTAAAGAGCTCTTCAATGTTTGGACGCGGAAGAAGGACAGTTCTGACTTTTCACAAGTGGAATTGAAGCAATGGTTCCATGAGTTAGCTTTCAATACGGCTCTCAGAATCGTAGCTGGGAATCGGTATTTTGGGGAAACTGCTGTGGTTAATGAGGAAGAAGCACAGAGATGTTTGAAAGCGTTAAGGGAATTCATGAGGCTGATTGGAACGTTCACTGTTGGAGATGCTGTTCCTTTTTTGAGGTGGTTTGATTTTGGAGGCGTTGAGACAGCCATGAAAGAGAATGTGAAGCAATTGGATGGTGTGGTGAGTGGGTGGATACAAGAGCATCGGCAGAATAGGGTTACAGGTAAAACAAATAATGAAGGTGATAAGGATTTCATAGATGTCATGCTTTCTTTGATTGATGGAACAACAATTCAAGGGTTTGATTGTGATACCATCATTAAAGCAACAACAATGGCATTAATTTTGGGAGCAACCGACACTAGCAGTGTTACTAATATATGGGCAATATGTTTGTTACTGAACAATCCTCGTACCTTGGAAAAACTAAGAGAAGAAATGGACATTCATGTTGGAAAAGAAAGGTGCATAAACGAGTCAGACATAAACAAGTTGGTGTACCTTCAAGCTGTGGTTAAGGAGACACTAAGGTTGTATCCACCTTCTCCTCTCTCAGGAATCCGCGAATTTAGAGAAGATTGCACCCTTGGTGGCTACCATGTGAGGAAGGGAACTCGACTACTAACAAATATTTGGAAGATCCAAGTAGACCCAAGCATTTGGGAAGATCCATTGGAGTTCAAGCCAGAGAGGTTCCTCACTACTCATAAGGATGTTGATGCAAAAGGGAACCATTTTGAGTATATACCTTTTGGGAGTGGTAGAAGGATATGTCCTGGAATATCATTTGGCCTGCGAAGTGCACATTTGACTCTAGCAAGCTTTCTTCACTCTTTTGAAATCTCAAAATTATCCAATGAGCCTGTTGATATGACTTCAGTGGTTGAGATAACCAACATCAAAGTTACTCCATTGAAGGTTCTTATCAAACCGCGTTTACCTCCCAATCTTTATTATAAAGCCATGTGA 1599 0.4303 MDLTQNSQTVVAIGLFCVIITTLCCFFFFHRSKASQTRRREPPMVDGAWPLLGHLPLLSGSKATHHLFGSIADKYGPLFTIKIGHPRVLVINNSETAKECFTTNDLAVSYRPNLVAVETMTYNHAMFGFAPYGPYWREIRKIVTLGFLSNYQIDLLSHVRVSEVQTSIKELFNVWTRKKDSSDFSQVELKQWFHELAFNTALRIVAGNRYFGETAVVNEEEAQRCLKALREFMRLIGTFTVGDAVPFLRWFDFGGVETAMKENVKQLDGVVSGWIQEHRQNRVTGKTNNEGDKDFIDVMLSLIDGTTIQGFDCDTIIKATTMALILGATDTSSVTNIWAICLLLNNPRTLEKLREEMDIHVGKERCINESDINKLVYLQAVVKETLRLYPPSPLSGIREFREDCTLGGYHVRKGTRLLTNIWKIQVDPSIWEDPLEFKPERFLTTHKDVDAKGNHFEYIPFGSGRRICPGISFGLRSAHLTLASFLHSFEISKLSNEPVDMTSVVEITNIKVTPLKVLIKPRLPPNLYYKAM* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3103 532 Gene3D Cytochrome P450 28 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3103 532 Pfam Cytochrome P450 46 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3103 532 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3103 532 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3103 532 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3103 532 SUPERFAMILY Cytochrome P450 48 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3103 532 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3103 532 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3103 532 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3103 532 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3103 532 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3103 532 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3103 532 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3103 532 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3103 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Amo16g3103 532 PANTHER CYTOCHROME P450 82C3-RELATED 9 528 - -
Amo16g3103 532 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3103 Amo-Chr16 133808525 133810805 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3103 15 528 Cytochrome P450 AT4G31970 47.025 3.15e-170 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3103 - - gmx:100802193 708.753