Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3101 ATGGGCCACCAAGATTCCCAAGCACTCGTCTCTGACATGCTTGAAAATTTTTTAAAGCAAATTAAGATGTTATATGAACAAGGAGCAAGGGCATTTTGGATACATAACACGGGTCCAATTGGTTGCTTGCCATTGAGCATGCCTAAGCACAATGCAAATAATAATACTGCAGTTCAAACTTTTAATAGTTTTTGGCCTATAAAAGAAAATACAGTAGAAAACCAAAAAGAAAACGACGTTGCGGTTTCTGGTTCACTTGATGAAAACGGGTGTGTCATATATGCAAACGACATAGCTAAAGATTTCAATAGTAAGCTCAAGAATGGAGTCCTCAAATTGAGGGCACAGTATCCAGATGCCTCTTTCACATACGTGGACATGTTCTCTGCTAAGTATGAGCTCATCAGCAACTCCAAAAGAGAAGGATTTGTTGATCCTTCAGAAATTTGTTGTGGTTATCATGAGGATGGGTACCATGTAAATTGTGGGAACAAAGCAATGATTAAAGGTAAAGAAATTTATGCTGGTTCTTGTAAAGATCCGTCAAAGTACATTAGCTGGGATGGTGTGCACTACACTGAGGCAGCAAATCGATGGATTGCTAATCGCATATTAAATGGTTCATTGTCAGATCCTCCACTTCCTATAACACACTCTTGTAAAAGGACTCCATAG 675 0.3881 MGHQDSQALVSDMLENFLKQIKMLYEQGARAFWIHNTGPIGCLPLSMPKHNANNNTAVQTFNSFWPIKENTVENQKENDVAVSGSLDENGCVIYANDIAKDFNSKLKNGVLKLRAQYPDASFTYVDMFSAKYELISNSKREGFVDPSEICCGYHEDGYHVNCGNKAMIKGKEIYAGSCKDPSKYISWDGVHYTEAANRWIANRILNGSLSDPPLPITHSCKRTP* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3101 224 Pfam GDSL-like Lipase/Acylhydrolase 4 204 IPR001087 GO:0016788
Amo16g3101 224 Gene3D SGNH hydrolase 2 208 IPR036514 -
Amo16g3101 224 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 4 222 - -
Amo16g3101 224 SUPERFAMILY SGNH hydrolase 113 206 - -
Amo16g3101 224 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 4 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3101 Amo-Chr16 133779189 133783450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3101 21 205 Pollen Coat Proteome AT1G75910 27.273 1.13e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3101 - - aip:107605082 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3101 16 133779189 133783450 Amo06g2767 06 92371325 92375857 hybridization