Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3047 ATGGAACCGGAATCTGGAGCTTCTACTTCTCGGAACCCTTCGCTGTTATCATGGGTGAATCTCTCTAGGAATCTATTATTAGCATATCAAAGCTTTGGTGTGGTGTATGGAGATCTGAGCACTTCACCACTCTATGTTTTCACAAGCACATTTCGAGGCAAATTGCAGGATCACCGCGATGAAGAAACTATATTTGGAGCTTTTTCTTTGATTTTCTGGACACTGACACTAATACCGTTGATTAAGTATGTGTTCATCCTATTGAGTGCTGATGATAGTGGCGAAGGTGGAACGTTTGCTCTTTATTCGCTGCTCTGCAGGCACGCCAAGTTTAATTTGCTCCCCAATCAACAAGCAGCTGATGAGGAGTTATCATCCTACAAATATGGTCCCTCGCAACAGGCCATAACCTCTTCTCCACTGAAGAGGTTTCTGGAGAAGCATAAAAGGTTAAGAACGGCACTGCTTATTGTGGTGTTGTTTGGTGCTTGCATGGTCATTGGCGATGGTGTTCTCACCCCAGCAATTTCAGTTCTAGCATCTGTATCAGGGTTACAAGTTACGGAAAGAAAATTAACTGATGGTGAGCTTGTCCTGCTTGCCTGTGTCATATTGGTTGGGCTGTTTGCTCTTCAACACATTGGCACACACAAAGTGGCATTCGTGTTTGCACCAGTTGTAATCATCTGGCTATTATCGATATTTTCTATTGGGCTGTATAACACAATTTTTTGGAATCCTAGAATTGTTCGTGCATTATCCCCATACTATCTCATCAAGTTCTTTATCAAGACTGGTAAAGAAGGTTGGATTTCTCTTGGAGGGATACTTCTCTGTATCACTGGAACTGAAGCTATGTTTGCAGATCTTGGTCATTTCACTGCTACATCGATAAGGATTGCATTTGCGTTTGTTATATACCCTTGTTTGGTGGTACAGTATATGGGCCAAGCTGCTTTCTTGTCTAAGAACCTTCAATCTATTCATAACAGTTTTTATGATTCAATACCTGAACCTGTATTTTGGCCTGTTTTTGTTGTTGCCACCCTTGCTGCTATTGTTGGGAGTCAAGCTGTTATAACCGCAACTTTCTCTATCATCAAGCAGTGTCATGCACTTGGCTGCTTTCCACGAGTTAAAGTTGTCCACACTTCAAAACATATATATGGGCAAATCTACATCCCAGAGATAAACTGGATACTCATGATCCTGACTCTTGCAATAACCATTGGATTTCAAGACACAACTATAATTGGAAATGCTTACGGACTCGCATGTATGACTGTAATGTTTGTGACGACCTTTCTGATGACTCTGGTCGCAATCTTTGTCTGGCAAAAAAGTGTTGTGATTGCTATAGCATTCCTTTTATTCTTTTGGGTGATAGAGGGCACCTATCTATCAGCAGCATTCATGAAAGTGCCTCAGGGAGGATGGGTTCCTCTTGTCTTATCCTGCATCTTCATGGTTGTTATGTATGTATGGCATTATGGTACTCGAAGGAAGTACAGCTATGATCTGCACAACAAAGTTTCATTGAAGTGGTTACTGGGTTTGGGCCCAAGCCTTGGCATTGTTCGAGTCCCAGGAATAGGTCTCATCTACTCAGAACTAGCAACTGGAATTCCTTCAATATTTTCCCATTTTGTAACAAATCTTCCTGCCTTTCACAAGGTGTTAGTTTTTGTCTGTGTGAAATCAGTCCCTGTTCCATATGTCTCCCCAGAAGAAAGATTCCTTATTGGTCGAGTTTGTCCGAGACCTTATCGAATGTACAGGTGCATTGTCAGATATGGGTACAAGGACATTCAAAGGGACGATGGAGACTTCGAGAACCATCTAATACAGAGTATAGCAGAGTTTATACAGAGGGAAGCAGAAGAACCACAGTACTCAAGTTCTGAAAGCTCTTCGCTCGATGGGAGGATGGCTGTTATAAGTACCAGAACCTTAGAATCCACTGCAAGCTTAATAGTTTCCGAGATTGAGGAAATTGGCGTGGACAGCTCCATCCCCAGCAGTAAATCTGTAACCCTGCGCAGCTTGCAATCGGTTTATGATGATGAAAGTCCACAAGTTAGAAGGCGTCGAGTAAGATTTCAGCTACCAAACAATCCTGGTATGGATCCTGCAGTTAGGGAAGAACTTGTGGATTTGATTCAAGCTAAGGAAGCTGGGGTTGCTTATGTATTGGGGCACTCATATGTTAAGGCTAGGAAATCATCCTCATTCTTGAAGAAGCTTGTGATTGATATCGGTTACTCATTTCTACGCAAGAATTGCAGGGGTCCTGCTGTGGCTCTTAACATTCCTCACATCAGTCTCATTGAAGTTGGAATGATATATTATGTTTAG 2355 0.4212 MEPESGASTSRNPSLLSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVFTSTFRGKLQDHRDEETIFGAFSLIFWTLTLIPLIKYVFILLSADDSGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSQQAITSSPLKRFLEKHKRLRTALLIVVLFGACMVIGDGVLTPAISVLASVSGLQVTERKLTDGELVLLACVILVGLFALQHIGTHKVAFVFAPVVIIWLLSIFSIGLYNTIFWNPRIVRALSPYYLIKFFIKTGKEGWISLGGILLCITGTEAMFADLGHFTATSIRIAFAFVIYPCLVVQYMGQAAFLSKNLQSIHNSFYDSIPEPVFWPVFVVATLAAIVGSQAVITATFSIIKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAITIGFQDTTIIGNAYGLACMTVMFVTTFLMTLVAIFVWQKSVVIAIAFLLFFWVIEGTYLSAAFMKVPQGGWVPLVLSCIFMVVMYVWHYGTRRKYSYDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGIPSIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENHLIQSIAEFIQREAEEPQYSSSESSSLDGRMAVISTRTLESTASLIVSEIEEIGVDSSIPSSKSVTLRSLQSVYDDESPQVRRRRVRFQLPNNPGMDPAVREELVDLIQAKEAGVAYVLGHSYVKARKSSSFLKKLVIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3047 784 Pfam K+ potassium transporter 29 602 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo16g3047 784 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo16g3047 784 TIGRFAM kup: potassium uptake protein 27 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo16g3047 784 PANTHER POTASSIUM TRANSPORTER 4 20 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3047 Amo-Chr16 132194606 132199306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3047 1 784 Inorganic Solute Cotransporters AT3G02050 78.707 0.0 1241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3047 K03549 - gmx:100776888 1431.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3047 16 132194606 132199306 Amo16g3047 16 132194606 132199306 ECH
Amo16g3047 16 132194606 132199306 Amo06g2420 06 85323767 85328507 hybridization