Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3027 ATGATTCTCTCTTACGCCCTCCTTGTTTTCCTTACACTACTCTTTTTCATCTTAACATTTAGAAAATCAGATCTACAAAGAAATCTTCCTCCTGGCCCACGGAGACTACCATTCATCGGCAACCTTCACCAAATTGGCGAGCTCCCCTATCTATCACTTCAAGAATTGTCAAGTCATCATGGGCCACTCATGTTCTTGAAGTTGGGTTCTGTTCCTACTTTGGTGGTCTCCTCCGCCGAGATAGCCAAAGAGATCTTCAAGAACCATGACTTGGCCTTCTCCGGCCGTCCCAAACTTTATGCCGGGAACCGTTTGGGATACAACGGTTCAGCTATGACTTTCACTCCTTATGGTAACTACTGGAAGGAAATAAGGAAAATTGTGATGTTGGAATTGCTGAGTGCAAAGAGGGTTCAATCTTTTCAAGCTGTGAGGTTTGAAGAGGTTCAAGTTCTCCTCCATTCCATAGCACTTTCCTGCGGTAGTCCTGTTAACCTAAGCCACTTGACGCTTTCTCTTACCAATAATATCGTTTGTCGGATCGCATTAGGCACAAGATTTGGGGATGCAAGTAGTAAGTTCTATGAGATGCTTAGGGAAACACAGGAGTTACTGGGAGGATTCTGCTTGGCTGATTTCTTTCCTTGGTTGGGATGGCTCAACAAATTCAACGGTTATGAGAGTAGGCTAGAGAAGAACTTCAAAGAGTTGGATAACTTCTACGACAAAGTGATAAAGGAGCATGCAGTTAATAATGATGATTCTGAGAGGCTTGGTATTATGGAGCAACGTCATGATGAAGATCTTGTTCATGTTCTTCTTCGACTTCAAAAGGATTCAAATCAAGAGATAGCCCTCAGCGATGACCAAATCAAGGGTGTTCTAACAGATATTTTCATAGCTGGAACCGACACGGCAGCTGCCACAACGATATGGACAATGTCGGAGCTAATAAGGAACCCAGAGAAAATGGAAAGAGCACAACAAGAGGTAAGAGAAGTAGTCTTGTCGAAGAAAAAAGTTATGGTGGAAGAGAGTGACCTTCCAATGCTTCCATACCTCAAATCAGTAGTAAAGGAGGCACTAAGAATCCATCCTCCAGCACCACTCCTGGTCCCAAGAGAGACAATCCAAACCTGCACCATCAAAGGGTATGAAATCGCTGCCGGAACGAGGGTTTTCATCAACGCGAAAACCATAGCAATGGACCCAACTTGTTGGGAGAATCCAACGGAGTTCTCTCCGGAGAGGTTCCTTCATAGTCCAATTGATTTCGGAGGGCATCACGTTGAGATGTTTCCCTTTGGAGCTGGTCGGAGGGGCTGCCCTGGAGTGAACTTCGCCATGCCATTGGTTGAGCTTTCTCTGGCGAATCTTTTGTTCCGTTTTGATTGGAAACTGCCAAATGGAGTCGGAAGGGAAGAGCTTGACATGCAAGAAGCAATTGGCATTACAATGCACAAGAAATCTCCTCTTTGCCTCATACCTTCCCCCTCTTTTGCTTAG 1506 0.4489 MILSYALLVFLTLLFFILTFRKSDLQRNLPPGPRRLPFIGNLHQIGELPYLSLQELSSHHGPLMFLKLGSVPTLVVSSAEIAKEIFKNHDLAFSGRPKLYAGNRLGYNGSAMTFTPYGNYWKEIRKIVMLELLSAKRVQSFQAVRFEEVQVLLHSIALSCGSPVNLSHLTLSLTNNIVCRIALGTRFGDASSKFYEMLRETQELLGGFCLADFFPWLGWLNKFNGYESRLEKNFKELDNFYDKVIKEHAVNNDDSERLGIMEQRHDEDLVHVLLRLQKDSNQEIALSDDQIKGVLTDIFIAGTDTAAATTIWTMSELIRNPEKMERAQQEVREVVLSKKKVMVEESDLPMLPYLKSVVKEALRIHPPAPLLVPRETIQTCTIKGYEIAAGTRVFINAKTIAMDPTCWENPTEFSPERFLHSPIDFGGHHVEMFPFGAGRRGCPGVNFAMPLVELSLANLLFRFDWKLPNGVGREELDMQEAIGITMHKKSPLCLIPSPSFA* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3027 501 PANTHER OS08G0105600 PROTEIN 4 497 - -
Amo16g3027 501 SUPERFAMILY Cytochrome P450 30 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3027 501 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3027 501 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3027 501 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3027 501 PANTHER CYTOCHROME P450 71A9 4 497 - -
Amo16g3027 501 Gene3D Cytochrome P450 20 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3027 501 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3027 501 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3027 501 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3027 501 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3027 501 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3027 501 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3027 501 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3027 501 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3027 501 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo16g3027 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Amo16g3027 501 Pfam Cytochrome P450 30 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3027 Amo-Chr16 131712604 131715884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3027 1 498 Cytochrome P450 AT3G48280 40.080 2.90e-137 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3027 K20617 - gmx:100806157 644.81