Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo16g3025 | ATGAAAAAGGGGAAAAATGCTCTTTTCACCATCCCTCCTGCGCTAGCCTATGGTGCATCTGGCTCCCCTCCAACTATTCCTCCGAATGCAACACTCCAGTTTAATGTCGAGCTTTTGCCTTGGACTAGTGTAAAGGACATATGTAAGGATGGTGGTATATTTAAAAAAATACTTAAGGAGGGGGAAGGATGGGAAAACCCCAAGGATCCTGATGAAGTATTAGTTAAGTATGAGGTTCTTCTGGAAGATGGAAAGGCTGTGGCTAAGTCTGATGGAGTGGAGTTCAGCATCAGAGAGGGTCACTATTGCCCTGCATTGTCAAAGGCTGTTAAAACCATGAAGAAGGGAGAGAAAGTTATTTTGACAGTGAAGCCACAATATGGATTTGGTGAGAAAGGGAAGCCAACAGATGGTGATGAAGGAGCAGTTCCACAAAATGCAACATTGCAGATTACTCTCGAGTTAGTCTCTTGGAAGACTGTGTCTGAAGTAACTGATGACAAGAAAGTGGTGAAGAAGATACTCAGTGAAGGGCAAGGATATGAGCGGCTAAATGAGGAGGCTGTTGTGAAAGCCACAAGTTATATTCAATAG | 594 | 0.4343 | MKKGKNALFTIPPALAYGASGSPPTIPPNATLQFNVELLPWTSVKDICKDGGIFKKILKEGEGWENPKDPDEVLVKYEVLLEDGKAVAKSDGVEFSIREGHYCPALSKAVKTMKKGEKVILTVKPQYGFGEKGKPTDGDEGAVPQNATLQITLELVSWKTVSEVTDDKKVVKKILSEGQGYERLNEEAVVKATSYIQ* | 198 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo16g3025 | 197 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 70 | 159 | IPR001179 | GO:0003755 | |
| Amo16g3025 | 197 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 65 | 156 | IPR001179 | GO:0003755 | |
| Amo16g3025 | 197 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 1 | 39 | IPR001179 | GO:0003755 | |
| Amo16g3025 | 197 | SUPERFAMILY | FKBP-like | 1 | 46 | - | - | |
| Amo16g3025 | 197 | Gene3D | - | 1 | 43 | IPR046357 | GO:0003755 | |
| Amo16g3025 | 197 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 175 | - | - | |
| Amo16g3025 | 197 | SUPERFAMILY | FKBP-like | 45 | 175 | - | - | |
| Amo16g3025 | 197 | Gene3D | - | 44 | 159 | IPR046357 | GO:0003755 | |
| Amo16g3025 | 197 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 175 | - | - | |
| Amo16g3025 | 197 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 1 | 42 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo16g3025 | Amo-Chr16 | 131632475 | 131633618 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo16g3025 | 1 | 191 | Calmodulin-binding Proteins | AT3G25230 | 79.058 | 3.22e-104 | 309 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo16g3025 | K09571 | - | aip:110263818 | 389.423 |