Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3018 ATGGTTCAAAAAATTAGGATTCAGTTATACCAAAACACAAACCATGATCATTTCTCTATGAACGGCGCCGACACAACCAAGAACCCAACCCCTCTCGCCGACGTTACTATCTCATCTTCTTACTGGCTCGTCCGCACCGGTGAACGCCCAGAAGCGCATTCCCAGCGTGTGGCTCCTTCCGACGGCACCGCATCAAGTTCACTTGCCCAACCGACCTGTGATAAAAATAACTGCATTATTATTGTTAAGACTTTTTCCGAAAATGCCATGCCAAGATTGGATGTTACTGAGGTTGGAAGTGAAGAGATGGATATTTGTTACGAGGACATGCCGCTTTTGGAACTTTCCCAGGTTGGAAGTGAAGAGATGGATCATGGTCACCAGGTACTGGATCACGATGGCCTTCGGGAAGATGAAATACCATGTGTTGGAATGCGGTTTGAGCAATTGCAAATGGCTCATGAATTCTATGTGACATACACAAAGAAAGTCGGGTTTTCTACTAAGATACGGACGACAACCTGTGATATGATCACAAATCAACCCATTAACCAAGCTATTCACTGTAAGAGGGATGGGTTCCATGTGTCTCGTGTCAAAGCGTCAACACGGAAGAACAGGATCTCAGCCGCTGGGTGCAAGGCAAGGATATACTTTTTCTTCAAGGTGGAGTTGAGTCACTCGCACCCATGTTCAGCGAGAAAGGCGGTGCACTACCATGAGTATAGCAAGCTGACCATGCATGCGAAGTGCTTTATTTTTCTTTATGTAGACCTCTTTGATGATCGATGCATGTGGGTCCCAATATTCTTCAAGGGTGAATTTTGGGCTGCCATGAAAAGCACGCAAAGGAGTGAGAGCATGCACTCATTCTACGAAAATTTTTTACACAGTCGGACTAGCTTGGTCCAATTTGTTCACAAATATGACAATGTGCTTGGAATTAAGGAGCAAAGGAAACTGGAGGATGATGCAGCAGACTTGAGGGGGGTTATCCCTTGTGCAACGACCTCACCTATAGAGAGACAATTTCAGCAGGAGTACACTACCTGCATGTTTAGGGATGTTCAAATTGAGTTTGTTAAGAAGGCTAATTGTAGGGTCTCTGTTGTTGCTGAAGAGGGGCCAGTGGTATGCATGAAGGTTGAAGAGGAAAAACTAGTGAATGATAGTATTCTTTGTGTTCCGTACGACGTCCACTTTTATCGATCCACACAGGAGGTTCATTGTGAGTGTAATCTATTTGAGAGTTCAGGAGTGTTATGCTGTCATTGTCTTGAAGTCTTCCATTCTTACAAGGTTTATAAAGTACCTAATCGATATGTTCTCCCTTGTTGGAGCAAGAACACAAAGCGCAAGCATACATATGTCAAGAGTAGTCACGACGTCAGTCGGTCGGATGAGATTCATGATTTTGTAAACGACGATGAAGAAACAGCCTTGCTCCATGCTGCTCTAGAAGAAACAAGAGTTAAGTTGACTGCTCACCGTGTCAACAAGAGGTCCGAGACTGTGGCGGACTCCCACAACAATAATGGCTCAACAAGTTCGAACGTTGCCGTTGTGATGGACATCCAAGCCCCATCGAAGGTCAACACAAAGGGCCGGCCAAAGAGTAAGAGGCTCGGCGCTACCCTGGAGAAGTCATTTAAAAAATCTGCTCGGAGAAAAAACAAGCATGACCCCTCGGTGGTTTGTCCGGAGTCAACTCAAGATGTAAGATTCGGTGGTGTTGTAGGCCAGGCTGATCCCGAACAAGTTGGTGGCTTCATATTAGTGGATGAGGCTGGTTTCATGGGGTAA 1803 0.4542 MVQKIRIQLYQNTNHDHFSMNGADTTKNPTPLADVTISSSYWLVRTGERPEAHSQRVAPSDGTASSSLAQPTCDKNNCIIIVKTFSENAMPRLDVTEVGSEEMDICYEDMPLLELSQVGSEEMDHGHQVLDHDGLREDEIPCVGMRFEQLQMAHEFYVTYTKKVGFSTKIRTTTCDMITNQPINQAIHCKRDGFHVSRVKASTRKNRISAAGCKARIYFFFKVELSHSHPCSARKAVHYHEYSKLTMHAKCFIFLYVDLFDDRCMWVPIFFKGEFWAAMKSTQRSESMHSFYENFLHSRTSLVQFVHKYDNVLGIKEQRKLEDDAADLRGVIPCATTSPIERQFQQEYTTCMFRDVQIEFVKKANCRVSVVAEEGPVVCMKVEEEKLVNDSILCVPYDVHFYRSTQEVHCECNLFESSGVLCCHCLEVFHSYKVYKVPNRYVLPCWSKNTKRKHTYVKSSHDVSRSDEIHDFVNDDEETALLHAALEETRVKLTAHRVNKRSETVADSHNNNGSTSSNVAVVMDIQAPSKVNTKGRPKSKRLGATLEKSFKKSARRKNKHDPSVVCPESTQDVRFGGVVGQADPEQVGGFILVDEAGFMG* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3018 600 PANTHER OS03G0843700 PROTEIN 259 496 - -
Amo16g3018 600 PANTHER OS03G0843700 PROTEIN 126 240 - -
Amo16g3018 600 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 259 496 IPR031052 GO:0006355
Amo16g3018 600 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 126 240 IPR031052 GO:0006355
Amo16g3018 600 MobiDBLite consensus disorder prediction 49 69 - -
Amo16g3018 600 ProSiteProfiles Zinc finger SWIM-type profile. 397 433 IPR007527 GO:0008270
Amo16g3018 600 Pfam FAR1 DNA-binding domain 155 219 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3018 Amo-Chr16 131375143 131379863 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g3018 FAR1 6.3e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3018 - - ahf:112732819 577.785