Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3004 ATGGGAAACTCTTGCCAAGAAACTCCACCACTACTTCTCCAAGACCTAAAAGTAACAATCCACCAAGCTTCAATGATTTTTCCCTCCAAAGAAACACATAACAATAACAATAACAACAACAATAACAAGTCTTTGTTCTTATCAAACATAGACAAAGTCCTAAACTTCGACGTGGAAACGGTTCATTTTTTCGCGGCAAACAAGGATTATCCGTCGTCCAAGGTTGCGCAGAAGCTCAAGGACGCCCTGGAGGACGCCCTTGTAGCTTACGAGTTCTTGGGAGGGAGAATGAAGATGAACTCCGAGACCGGAAGGTTAGAGATAATTTGCAATGGGGAAGGTGCTGGGTTTGTTGTGGCTTCTTGTGATTATAGATTGGATGAGATTGGAGACTTGGCTTTTCCAAACCCAGCATTTGCACAATTTGTTCATAAGTCTAAGGATTTCCTGAAACATGGTGATTCTCCACTATGTGTTGCCCAGATAACATCATGCAAGTGTGGGGGCTTCGTAATTGGCTTCACCACAAGCCACACAACCTTTGATGGTCTCAGCTTCAAAACTTTCTTAGACAACCTTGCCGCGTTGGCTTCCAACAAACGAATGCCTGTGATCCCCTCCCATGACAGGCACCTCCTTGCCGCACGATCTCCACCACGTGTCACCTTTCCACATCCCGAGATGCTTGACCTTGGAGAATTCCCCACAAGCGCTGAAGCTGGCGTCTTCGAAGCCTCCTCCGAGGAACTCCACTTCAAAGTCTTCCATTTAACCACTGATAACATCAACTGCCTCAAGGAGAAAGCCAAGGATAGTAATGTAAATTCCCGCGTCACCGGCTTTAACGTTGTTACCGCGCTTGTCTGGAGGTGCAAAGCTCTATCCTTTTCGCCGCCGGATCCTAATAGGTCGTCCACCATACTCTATGCCGTTGATATTCGGTCAAGGCTGAGCCCTCCATTGCCAAAATCCTACGCGGGTAACGCGGTTCTAACCGCTTACGCAACAGCGAAATGCGAGGTACTGGAGAAGGGGTCGTTTGCGAAGTTGGTGGAGATGGTAAGTGAGGGTGCAAAGAGAATGAATGATGAGTATGCGAGGTCTATTATAGATTGGGGAGAGTTGCACAATGGATTTCCAAGTGGAGAAGTTTTGGTGTCTTCATGGTGGAGATTAGGATTTGAAGAGGTGGAGTATCCTTGGGGTAAGCCAAGGTATTGTTGTCCCGTGGTTTACCATAGAAAGGACATTATACTATTATTTCCTCCTGTTGGTGGCAGCGACGGCAGTGATAATGGGATTAATATTATAGTGGCACTTCCTCCTAAGGAAATGGACAAATTCAAGAATTTCTTCTATGAATTCTTGATATGA 1374 0.46 MGNSCQETPPLLLQDLKVTIHQASMIFPSKETHNNNNNNNNNKSLFLSNIDKVLNFDVETVHFFAANKDYPSSKVAQKLKDALEDALVAYEFLGGRMKMNSETGRLEIICNGEGAGFVVASCDYRLDEIGDLAFPNPAFAQFVHKSKDFLKHGDSPLCVAQITSCKCGGFVIGFTTSHTTFDGLSFKTFLDNLAALASNKRMPVIPSHDRHLLAARSPPRVTFPHPEMLDLGEFPTSAEAGVFEASSEELHFKVFHLTTDNINCLKEKAKDSNVNSRVTGFNVVTALVWRCKALSFSPPDPNRSSTILYAVDIRSRLSPPLPKSYAGNAVLTAYATAKCEVLEKGSFAKLVEMVSEGAKRMNDEYARSIIDWGELHNGFPSGEVLVSSWWRLGFEEVEYPWGKPRYCCPVVYHRKDIILLFPPVGGSDGSDNGINIIVALPPKEMDKFKNFFYEFLI* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3004 457 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 14 455 - -
Amo16g3004 457 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 455 - -
Amo16g3004 457 Gene3D - 236 454 IPR023213 -
Amo16g3004 457 Pfam Transferase family 16 453 - -
Amo16g3004 457 Gene3D - 12 229 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3004 Amo-Chr16 131013115 131020085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3004 16 455 Monolignol Biosynthesis Gene Families AT5G48930 29.258 3.16e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3004 K13065 K15400 gmx:100805510 686.411