Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2991 ATGGATCTCAAAAGCCTCTTCACATTTTTACTCTTATTGATGCCATCATTCTGTTCCTCTCAATCCCTGACGATTAACAACATTTTCTTTACTCATCGTAAGATACTTCCAAAACAAAAATCCAATGATAATAATAACAATAACGATGTTACTTCTTATGCTGTCATCTTTGATGCTGGTAGCTCCGGATCTCGTGTTCATGTCTTCCATTTTGATCAGAATCTCAACCTTCTTCATATTGGCAACGAAATTGAGTTTTATAAGAAGATCGAACCCGGTTTGAGTGCATATGCAGATAATCCAGAAGAAGCAGCAGAATCTCTGATTCCACTCTTAGACGAAGCACAAGATATTATTCCACCGCAACTCCAACCCAAAACACCCCTTAGGCTTGGGGCAACTGCAGGTTTAAGGTTGTTGGAGGGTGATACTGCTGAAAGAATATTGCAAGCGGTTAGGGATATGTTCAGGACAAGAAGTAACCTGAACGTTCAATCTGATGCAGTAACTGTTATTGATGGAACCCAAGAAGGTTCTTATATGTGGGTGGCACTAAACTATCTACTGGGAAACTTGGGAAACAAGTATTCAAGGACGGTGGGAGTGGTTGATCTTGGAGGTGCATCAGTTCAAATGGCATATGCTATTTCAAAGCACGCAGCTCAAAATGCACCATTACCACCAGATGGACAGGACCCATACATTAAAAATGTCATTCTTAAAGGAACCGAATATAACCTCTATGTTCATAGTTACTTGCGCTATGGTAGTGATGCTGCTCGTGCTGAAATTTTGAACATCACACATAATTCTGCTAACCCTTGCGTTTTAGCTGACTTTGATGGGACATATGCATACTCAGGAAATGAGTATAGGGCATATGCACCAAGTTCAGGGTCCAGCTTTGAAAAATGCAGGCATATAGTGCGTAAGGTCCTCAAATTGGACGCACCATGTCCATATAATAAAGATTGCACTTTTGGTGGAATATGGAGTGGTGGAGGTGGTAATGGACAAAAAAATCTCTATGTTGCTACGTCTTTCTTTTATATGGCATCACAGACGGGTATAGTTGATCCGAACAAACCCAATTCGAAGGTTATTCCGGCGGATTACAAGGTTGCAGCTAAGAAAGCATGTAATACAAAATATGAGGATGCTGCATCTATTTATCCTCTTATTACCATTGACAGACTTCCTTATGTCTGCATGGATCTCACATACCAATATACATTGCTCGTTGAGGGATTCGGCATAGAACCATGGCAAGAGATTACAGTCACTCAGCAAATTGAATATGAAGATGCTTCCGTAGATGCAAGCTGGCCTCTAGGGAGTGCCATAGAAGCCATATCTTCATTACCTAAATTTGAGCGATTGATGTATTTTATTTAA 1395 0.4036 MDLKSLFTFLLLLMPSFCSSQSLTINNIFFTHRKILPKQKSNDNNNNNDVTSYAVIFDAGSSGSRVHVFHFDQNLNLLHIGNEIEFYKKIEPGLSAYADNPEEAAESLIPLLDEAQDIIPPQLQPKTPLRLGATAGLRLLEGDTAERILQAVRDMFRTRSNLNVQSDAVTVIDGTQEGSYMWVALNYLLGNLGNKYSRTVGVVDLGGASVQMAYAISKHAAQNAPLPPDGQDPYIKNVILKGTEYNLYVHSYLRYGSDAARAEILNITHNSANPCVLADFDGTYAYSGNEYRAYAPSSGSSFEKCRHIVRKVLKLDAPCPYNKDCTFGGIWSGGGGNGQKNLYVATSFFYMASQTGIVDPNKPNSKVIPADYKVAAKKACNTKYEDAASIYPLITIDRLPYVCMDLTYQYTLLVEGFGIEPWQEITVTQQIEYEDASVDASWPLGSAIEAISSLPKFERLMYFI* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2991 464 Pfam GDA1/CD39 (nucleoside phosphatase) family 48 455 IPR000407 GO:0016787
Amo16g2991 464 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 172 187 IPR000407 GO:0016787
Amo16g2991 464 Gene3D Exopolyphosphatase. Domain 2 175 432 - -
Amo16g2991 464 Gene3D - 39 174 - -
Amo16g2991 464 CDD NBD_sugar-kinase_HSP70_actin 55 214 - -
Amo16g2991 464 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 5 464 IPR000407 GO:0016787
Amo16g2991 464 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 5 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2991 Amo-Chr16 130249028 130257961 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2991 45 453 Calmodulin-binding Proteins AT3G04080 54.034 3.09e-156 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2991 K14641 - gmx:100781628 602.823