Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2921 ATGGTGAGCATCCAATCTTCCTACACGGTGACCCCTTCAGAGCCCACACCAGAAGTGAGGCTCTTCTCCCTCTGCGAGCAAATCAAACTTCGCACACACGCTCCCTCCTTTTACGCCTACAACCCCACTAACTTCGACAAAATCAACATCCACAACCTCAGAGACGCTCTCAGCAAGGCCCTCTCCATCTACTACCCTTTCGCCGGCAGACTCTGCTGGACGCAGGGTGGTAGATGGGAGATCCATTGCAACGCTAAAGGAGCCTTGCTAATTGAAGCTTCCTGCAAAGGGAAGACACTCGAGGATCTTCGAGACTTTGTTCCCAACGGTTTGCTCGCCAGAGGGGAACCTCTGGACGAATCTGATCAGTATCCTTGCCATGACCGTACGGAGCTGAACTCTCGGAAGATGAGTACGGGTTCGGAGTTCAGTGACCAGAATGGTCATGACCATTCTGAGTATGGAGCCCCGCCCCCATGGCTAGGTTCATTGGGAACCGAAGACGCTAAAGTCACCGTCGAAGTCATGAAGCTCACAGGGGAGCAAGTCAAGAAGCTCAAAATGAAAGCCACGTCTACCAACGGTAACGGTGAAATGACGAAACCCTTCTCGAGTTTCGAGGCCATTGCGGGGCATTTATGGAAGTCTGTTAGTAAAGCAAGATACGAAGGAAACAGTGCACAGCCAACCAGGCTAACGACTTTAGTTAACTGCAGGAACCGTCTAAAGCCGCCGCTTCCCCCGGTGTACGCGGGAAACGCAGCTTTCCCTACGACGACGCCTACTTGTACCTTTGGCGACCTTATAGAGAACCCTGTGGGGTTCGCGGCCGCCAAAGTGAAGGGGGCGATCGCCAAGGTGGATGACAAGTTCGTCAGATCCGCTCTTGAATACATTGATAATGTAAAAGACATGAACTTGATAAGGTACAATTTTCACTACCCTGCCAAGAGTGTTCATAAGGGACCTTCGAAAGGGAATCCGAACTTATTCGTAGTGAGTTGGATGAATTTCTCATATGAGCATGCTGATTTTGGTTGGGGTGTACCTTATTATTTTGGACCTGTGTATATGGATGCTGAGGGTAAAGCCTTTTGTCTCAACAAACCTAATGGTGATGGTATGGTACATGTGGCTATCTCTTTGGACTCGGCTCACATGCCTGCTTTCAAGAAAATCTTCTATGAGGACATATGA 1197 0.4971 MVSIQSSYTVTPSEPTPEVRLFSLCEQIKLRTHAPSFYAYNPTNFDKINIHNLRDALSKALSIYYPFAGRLCWTQGGRWEIHCNAKGALLIEASCKGKTLEDLRDFVPNGLLARGEPLDESDQYPCHDRTELNSRKMSTGSEFSDQNGHDHSEYGAPPPWLGSLGTEDAKVTVEVMKLTGEQVKKLKMKATSTNGNGEMTKPFSSFEAIAGHLWKSVSKARYEGNSAQPTRLTTLVNCRNRLKPPLPPVYAGNAAFPTTTPTCTFGDLIENPVGFAAAKVKGAIAKVDDKFVRSALEYIDNVKDMNLIRYNFHYPAKSVHKGPSKGNPNLFVVSWMNFSYEHADFGWGVPYYFGPVYMDAEGKAFCLNKPNGDGMVHVAISLDSAHMPAFKKIFYEDI* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2921 398 Pfam Transferase family 168 396 - -
Amo16g2921 398 Pfam Transferase family 1 110 - -
Amo16g2921 398 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 112 398 - -
Amo16g2921 398 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 3 112 - -
Amo16g2921 398 Gene3D - 164 397 IPR023213 -
Amo16g2921 398 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 112 398 - -
Amo16g2921 398 MobiDBLite consensus disorder prediction 120 135 - -
Amo16g2921 398 MobiDBLite consensus disorder prediction 117 161 - -
Amo16g2921 398 Gene3D - 1 129 IPR023213 -
Amo16g2921 398 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2921 Amo-Chr16 128141156 128142523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2921 2 396 Monolignol Biosynthesis Gene Families AT5G48930 32.462 6.53e-57 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2921 K13065 - gmx:100775549 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2921 16 128141156 128142523 Amo06g2215 06 79161168 79162535 hybridization