Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2903 ATGGCTCTTTCTCGTACTCTAATAATAATCCTTGTTGCATTTTCTACCATCTTCTCAACCATAGCTGTCGAAGAATACATAGTTGGAGATGACTATGGTTGGAGAACATTATTTGATTACCAAGCTTGGGCTGCAGACAAGAATTTCTATGTTGGGGACCGGATTGTGTTCAAGTATGTTCCCGGGTGGGACAACGTGGTGAGAGTGAATCCAGATGAGTTTATAACTTGTTCAGTTTCTCCTAATGCAATAACATTGAGTAGTGGAGAAGATGAGATTATATTTGGAGGCACAGGGGCAAGATGGTACATTTCAAGTATTGGTAATCATTGTAAATTGGGACAAAAGCTTGCTATATATGTGTGGCCAGCATGGTCTCCTCCATTACCTTCTCCTGCACCATGGACTCAGCCTCCTTATGCACCATGGACTCCTATAACACCTTCCGCTCATCCTCCTTATACACCACCTGCACCATGGACTCCTATAACGCCTTCAATAGTTACGCCACCTGCACCATTGACTCCTATAATGCCTCCGTCTGAACCTCCTTATGCACCATCTGCACCATGGACTCCTATTACACCTTCGGTCGAGCCTCCTTATGCACCTTCAATAGCTACACCACCTGCACCATGGACTCCTATAACGCCTTCAGCTGAACCTCCTTATGCACCATGGACTCCTATAACCCCTTCAACTGAATCTCCTTATGCACCTCAAATAATACCTACCCCAATCGCACAAGCTCCACGGACTCCTGGAACACCTTCATCTTCTATACCTCTTGCACCTGCACCTTCCTCTAAGCTTCGTTATGCTTCACGGACTACTAGCTTCTCCCACTTTGCTCGATCAATGCCAAAGAAACCATTCAAAATATCTCGTTAA 891 0.4501 MALSRTLIIILVAFSTIFSTIAVEEYIVGDDYGWRTLFDYQAWAADKNFYVGDRIVFKYVPGWDNVVRVNPDEFITCSVSPNAITLSSGEDEIIFGGTGARWYISSIGNHCKLGQKLAIYVWPAWSPPLPSPAPWTQPPYAPWTPITPSAHPPYTPPAPWTPITPSIVTPPAPLTPIMPPSEPPYAPSAPWTPITPSVEPPYAPSIATPPAPWTPITPSAEPPYAPWTPITPSTESPYAPQIIPTPIAQAPRTPGTPSSSIPLAPAPSSKLRYASRTTSFSHFARSMPKKPFKISR* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2903 296 MobiDBLite consensus disorder prediction 252 270 - -
Amo16g2903 296 MobiDBLite consensus disorder prediction 171 190 - -
Amo16g2903 296 PANTHER BLUE COPPER PROTEIN-LIKE 5 139 - -
Amo16g2903 296 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
Amo16g2903 296 SUPERFAMILY Cupredoxins 25 122 IPR008972 -
Amo16g2903 296 Gene3D - 23 125 IPR008972 -
Amo16g2903 296 PANTHER BLUE COPPER PROTEIN 5 139 IPR039391 GO:0009055
Amo16g2903 296 MobiDBLite consensus disorder prediction 245 270 - -
Amo16g2903 296 ProSiteProfiles Phytocyanin domain profile. 24 123 IPR003245 GO:0009055
Amo16g2903 296 CDD Phytocyanin 25 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2903 Amo-Chr16 127288351 127290285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2903 8 182 Phytocyanin Superfamily AT5G53870 32.804 6.97e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2903 - - aip:107647247 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2903 16 127288351 127290285 Amo16g2903 16 127288351 127290285 ECH