Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2895 ATGGCCAAGCACCAATTGAATCGCTCCGATCGCCGCAGCACCGCAATCAACACCAAGCTCTATGAAAGGGACAAAATCGCAAGGGATGATTCCAAGAAGTTTGAGTTGATATTTGGCGAAATGGAGAGGTTGCATCAACTAGAACAATTGGCTGATGCAAAGGCTCTGTTGGACATAACGGAATCCTTGGTAATGAATGGTCCCATCTCTGCTAAAGCAATACAGAGGAAAGCTGTCAGTCGTAGAAGTAGGAAGCGTGTGAGGCCTAATGAATTAGCTCGGCCAGAAGAGCTTGGCGGAGGTCCAAGAGAAGTGAAAGCTGATACAGATAAAAATATGTTAACGATGTTTAACATCTTAAGGAAAAATAGCGTTGTTAAGCTTGAGAATTTTATTTTGAATAGGAACTCCTTTGCTCAAATAGTGGAGAATTTATTCGCTTTATCATTCTTAGTCAAAGATGGGCTGGCTAAAATAAAAGTCAACGAGGCTGGATTACAACTAGTAGTGTGTGACACCAGAAATGTCCCTCATGCAAATGCAATTCGTGCTGGGAATGTTGCTTTCAGTCACTTTGTGTTCAGATTGGATTTTAAGGATTGGAAGCTAATAATCGATTTTGTTGGGATTGTGGAGGATCTAATGCCTCATAGGGAATAG 660 0.4152 MAKHQLNRSDRRSTAINTKLYERDKIARDDSKKFELIFGEMERLHQLEQLADAKALLDITESLVMNGPISAKAIQRKAVSRRSRKRVRPNELARPEELGGGPREVKADTDKNMLTMFNILRKNSVVKLENFILNRNSFAQIVENLFALSFLVKDGLAKIKVNEAGLQLVVCDTRNVPHANAIRAGNVAFSHFVFRLDFKDWKLIIDFVGIVEDLMPHRE* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2895 219 PANTHER UNCHARACTERIZED 21 66 IPR027786 GO:0005634|GO:0006281|GO:0030915
Amo16g2895 219 PANTHER UNCHARACTERIZED 65 219 IPR027786 GO:0005634|GO:0006281|GO:0030915
Amo16g2895 219 MobiDBLite consensus disorder prediction 85 103 - -
Amo16g2895 219 MobiDBLite consensus disorder prediction 80 103 - -
Amo16g2895 219 Pfam Nse4 C-terminal 126 215 IPR014854 -
Amo16g2895 219 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 21 66 - -
Amo16g2895 219 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 65 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2895 Amo-Chr16 127158483 127160991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2895 64 219 Non-SMC Element family AT1G51130 52.564 6.47e-49 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2895 K22825 - mnt:21400996 186.422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2895 16 127158483 127160991 Amo16g2895 16 127158483 127160991 ECH