Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2886 ATGAAGAGGGGAGATGCTACCAGTTGCAGCAAGGGTCTGGGGAGAGAAGGCTGTCCTCCTCATCATAGGGTTGCTATGATGGACTCTAAACTCCTTGCTCCCCATTTTTACCGATGGGAGACCCCATATATCAAAATTAGTAAGATTATTAGGTTAAGCCTTCTTCCACAACGAAAATTGGAGACCGTGGAAAGGTGTTTGTTTGATCTTGCAAGAGCATATGCACCAAGTACAATTTTCATTGATGAAATTGATTCTCTGTGCAATGCTAGGGGGGCTTCTGGGGAACATGAATCATCCAGAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGATGGTGTAAACAATAGTTCCACAAATGAAGATGGTACCCGTAAAATAGTAATGGTTTTGGCAGCCACAAACTTCCCTTGGGACATAGATGAGGCACTGAGGCGAGGGCTGGAAAAGCGTATATACATTCCTCTTCCGAATTTTGAGAGTCGTAAAGAGTTGTTGCGTATCAATTTGAAGACTGTGGAGGCAAGTTAG 531 0.4369 MKRGDATSCSKGLGREGCPPHHRVAMMDSKLLAPHFYRWETPYIKISKIIRLSLLPQRKLETVERCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVNNSSTNEDGTRKIVMVLAATNFPWDIDEALRRGLEKRIYIPLPNFESRKELLRINLKTVEAS* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2886 176 CDD AAA 43 156 - -
Amo16g2886 176 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 61 176 - -
Amo16g2886 176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 171 IPR027417 -
Amo16g2886 176 PANTHER AAA DOMAIN-CONTAINING 61 176 - -
Amo16g2886 176 Gene3D - 158 174 - -
Amo16g2886 176 ProSitePatterns AAA-protein family signature. 128 146 IPR003960 GO:0005524|GO:0016887
Amo16g2886 176 Gene3D - 65 157 IPR027417 -
Amo16g2886 176 Pfam ATPase family associated with various cellular activities (AAA) 66 156 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2886 Amo-Chr16 126961850 126963479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2886 61 176 Calmodulin-binding Proteins AT3G56690 42.857 8.72e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2886 K07767 - egr:104423135 216.853