Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2819 ATGGCAAATAGAACTCATCATCCTTCAGTGTTTCTGGTTGTGATTACAATTTTACTTTCCATCTATCAATCCGAGCAACGGCAATCACAGCAATCTCTGATCCTCTTAAGAATTCAACAGATATTGAACTTTCCTGTTGAATCAAGCAATTGGAACAATAACCACTTAGATTTTTGCAAGGGAGATTCAAATTCTTCTTCTCTCACTGTTGTATGCTATGAAGGAAACATAACACAGCTTCATATAATTGGTGACAGAACTTCACCACTTGCCAAGAATTTCTCAATGGACTCCTTAGTCAAAACCTTGACAAGGCTTCCAAGTTTGAAGGTCCTCACACTGGCCTCTCTGGGTTTGTGGGGTTCCTTGCCTGACAAGATTGCGCGGCTGCAGTCGTTGGAAATCGTTAATGTTAGTTCCAATTTTCTTTATGGTGCCCTGCCTCGAGAGGTTTCATCGCTGTCGAATCTCCAAACACTCATTCTTGATAACAATTTGTTTTCCGGCCGGCTTCCAAATTGGCTTGACTCACTTTCAACCTTAAGAGTGTTAAGTTTGAAGAACAATGTATTCAATGGATCGCTTCCAAATTCTCTTGGTAGCTTGGAGAATTTGAGGATTCTTTCACTTTCGCATAACCACTTTTTCGGGCTAGTACCTGATTTGAGCCAATTGACAAATCTTCAGGTGTTGGAACTGGATGATAATGCTTTTGGACAGCAGTTTCCTCGGCTTGGTAACAAATTGGTTACTTTAGTCCTAAGGAACAATAGTTTCAGGACTGGAATCCCTGCTGGATTAAGCTCATATTTTCAGCTTGAACAATTTGATATTTCATCAAACAGATTCGTGGGGCCATTCCAGCCATCATTGCTGTCTCTTCCTTCCATTACCTATCTGAACATTTCTGGAAACAGATTAACAGGGAAGCTTTTTGAGAATCTGTCTTGCAATACTCAACTTGATGTGGTGGATTTGTCTTCGAATCTTTTGACAGGTAGCGTACCGAAATGCTTGATCTCGAATTCCAGTAATAGGACTATACTATATGCTAGAAATTGTTTAGAAACAAGGAATCAGATTCAGCAGCCGGCGCCATTTTGCCACACGGAAGCTTTAGCCGTTGGGATATTACCTGACATAAAAAAGAAGCACAAAGAAAAAGTTTCTAAGGTAGTTATCTCCCTTGGCATAGTAGGTGGAACTCTTGCAGGAGTAGCACTTGCTTTGTTGATTTTCTTTCTTGTTAGAAGAGGAAATTCTAGAAGAAGAATGAAGAATCCTCCAACAAGGTTTATATCAGAAAATGCAGCTTCTGGATACACCTCTAAGTTGCTCTCTGAAGCAAGATATATATCGCAAACAAAGAAGTTTGGCACGGTAGGCCTGCCAAGTTATCGAAGTTTTTCATTGGAAGAGATTGAGGCAGCTACAAACTACTTCGACACGGCTTCTTTAGTGAGTGAAGATTCTTATGGCAAGATGTACAGAGGTCAGCTGAAGAACGATTTGCTCGTCGCCATAAGATGCATAAAACTGAAAAAGAGGTACAGCACGCAGAACTTCGCACACCACATAGAGTTGATATCGAAACTTAGGCACCGGCATCTAGTCAGTGCTCTTGGACACTGCTTTGAATGTTCTCTAGAAGATTCAAGTGTCAGCAAAATATTTCTTGTCTTTGAATACATACCGAATGGCACACTCAGGAGCTGGATATCTGATGGTGACACAATGAAATCAATGAGTTGGATCCAGCGCTTAGGAGCCGTGACCGGAATAGCAAAGGGAGTTCAATTTTTGCATACAGGGATTGTCCCCGGTGTATATTCGAACAATATCAACGCTGAAGATGTTCTACTGGATCAGAATCTTGTTGCGAAAATCTGCAGTTATAACCTGCCTTTGTTATCTAACATAGGAAAGGTAAGAAGAGCATAA 1941 0.408 MANRTHHPSVFLVVITILLSIYQSEQRQSQQSLILLRIQQILNFPVESSNWNNNHLDFCKGDSNSSSLTVVCYEGNITQLHIIGDRTSPLAKNFSMDSLVKTLTRLPSLKVLTLASLGLWGSLPDKIARLQSLEIVNVSSNFLYGALPREVSSLSNLQTLILDNNLFSGRLPNWLDSLSTLRVLSLKNNVFNGSLPNSLGSLENLRILSLSHNHFFGLVPDLSQLTNLQVLELDDNAFGQQFPRLGNKLVTLVLRNNSFRTGIPAGLSSYFQLEQFDISSNRFVGPFQPSLLSLPSITYLNISGNRLTGKLFENLSCNTQLDVVDLSSNLLTGSVPKCLISNSSNRTILYARNCLETRNQIQQPAPFCHTEALAVGILPDIKKKHKEKVSKVVISLGIVGGTLAGVALALLIFFLVRRGNSRRRMKNPPTRFISENAASGYTSKLLSEARYISQTKKFGTVGLPSYRSFSLEEIEAATNYFDTASLVSEDSYGKMYRGQLKNDLLVAIRCIKLKKRYSTQNFAHHIELISKLRHRHLVSALGHCFECSLEDSSVSKIFLVFEYIPNGTLRSWISDGDTMKSMSWIQRLGAVTGIAKGVQFLHTGIVPGVYSNNINAEDVLLDQNLVAKICSYNLPLLSNIGKVRRA* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2819 646 Gene3D Ribonuclease Inhibitor 30 194 IPR032675 -
Amo16g2819 646 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 642 - -
Amo16g2819 646 Gene3D Phosphorylase Kinase; domain 1 451 563 - -
Amo16g2819 646 SUPERFAMILY Protein kinase-like (PK-like) 462 635 IPR011009 -
Amo16g2819 646 Gene3D Transferase(Phosphotransferase) domain 1 564 639 - -
Amo16g2819 646 Gene3D Ribonuclease Inhibitor 195 374 IPR032675 -
Amo16g2819 646 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 7 642 - -
Amo16g2819 646 ProSiteProfiles Protein kinase domain profile. 481 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g2819 646 Pfam Leucine rich repeat 155 215 IPR001611 GO:0005515
Amo16g2819 646 ProSiteProfiles Leucine-rich repeat profile. 204 226 IPR001611 GO:0005515
Amo16g2819 646 SUPERFAMILY L domain-like 50 354 - -
Amo16g2819 646 Pfam Protein tyrosine and serine/threonine kinase 488 634 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2819 Amo-Chr16 124799242 124801726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2819 44 643 Miscellaneous Gene Families AT3G03770 59.934 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Amo16g2819 PK_Tyr_Ser-Thr 1.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2819 - - gmx:100807539 967.222