Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2807 CAACGATCACTCGCTCGCACTCGTCCTCTCCAGAATCAGAAAGCCAAGTACCCAGAGGTGCGAACTGTTCTCTTGAGGGCTGCATTCTGTGGCTATGGTTCTCGCTGCCGTTTCAATCATCCGCATGACCGTGCGACGGAAACTTGGAGTATTGAGGCTAAGATCTTGACCATTTGGGAAGATGCTACCATTGTTAATGAAAATATGCAGAAACTCTTACATGTGGTCTTGATGGATAAGCAGCACCACAAGGTCCAAGCAATTGTTGAGGATGATTTGATCACAACTTTTATTCATCAGTTGAAAGAAGGACACATATTCATTATTTCCAACTTCAAAGTGATACCTAATGGTGGATTGGTTAGGGTTACAAGACATCGGTTCCGCATCCTTTTCAAGTGTAGTACCTCTGTTGTTGCAACTGCAAATAGGGTCATACCTAATCCTGGTTTAAGTTTAACCTCTATGGATGAGATTCTTCAAAAGCACACTGATTATGAGTACTTAATAGACATCAATTGTTTGAAAAAGTATCAGAGACCACCAGTTCTTATTTTGCAATCTTTCAAGATTAAAGTCAATAGAGATAAAGTTAGTCTCCAAAATGTGATCAATGTTTTTCGGGTTTCAATCAACCCTGATATGTAG 648 0.4028 QRSLARTRPLQNQKAKYPEVRTVLLRAAFCGYGSRCRFNHPHDRATETWSIEAKILTIWEDATIVNENMQKLLHVVLMDKQHHKVQAIVEDDLITTFIHQLKEGHIFIISNFKVIPNGGLVRVTRHRFRILFKCSTSVVATANRVIPNPGLSLTSMDEILQKHTDYEYLIDINCLKKYQRPPVLILQSFKIKVNRDKVSLQNVINVFRVSINPDM* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2807 215 SUPERFAMILY Nucleic acid-binding proteins 48 141 IPR012340 -
Amo16g2807 215 Pfam Domain of unknown function DUF223 75 169 IPR003871 -
Amo16g2807 215 CDD RPA1_DBD_A_like 50 138 - -
Amo16g2807 215 Gene3D - 43 143 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2807 Amo-Chr16 124305760 124308257 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Amo16g2807 DUF223 5.9e-13 CL0021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2807 - - ahf:112717929 275.404