Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2790 ATGCCATCGTTTGCCCCTCTAGACATCGCTACTTTTGAATCGTGTTCTGTCACTCGAATATGCTGCAAGAAGCTATCAGAAAGTGGCATTGATGAGAAGAAGCACAAACCCTCCACCAGCAATACCACTGCCTCTAAATCCAAGGACATAATGGAAGATTACAATTTTGCTATGAAGAGGATGATGAGGAATCCTTATGAGTATCACCACGATCTGGGTATGAATTACACACTTATAACTGACAATCTCATTGTGGGATCCCAACCACAAAAACCTGAAGACATCGATCACCTCAAGAAGGAAGAGGGTGTGACATACATTCTGAATGTGCAGCAAGATAAGGATGTAGAATATTGGGGAAATAGACTTGAGGTCGATAACAAGGAGGTGTCACGAACTCGATGTTCGACATATGAGGAGGCCGGTAAAAATTTTAATTTTTCCTATATGGCAATAGACTTTGATCCAAACTCCTTGCGAAATGTCCTACCTAAAGCAGTCTCATCATTGGAATGGGCAATCTCAGAGGGAAAAGGAAGAGTTTATGTGCATTATACTGCTGGACTTGGGAGAGCACCAGGGGTGGCAATAGCTTATTTGTTCTTATTCTATGACATGAATGTGAGTTCTAAACTTCCACCTATCTTTGATTCAAGAAATGATTATCAAATTTGA 675 0.4074 MPSFAPLDIATFESCSVTRICCKKLSESGIDEKKHKPSTSNTTASKSKDIMEDYNFAMKRMMRNPYEYHHDLGMNYTLITDNLIVGSQPQKPEDIDHLKKEEGVTYILNVQQDKDVEYWGNRLEVDNKEVSRTRCSTYEEAGKNFNFSYMAIDFDPNSLRNVLPKAVSSLEWAISEGKGRVYVHYTAGLGRAPGVAIAYLFLFYDMNVSSKLPPIFDSRNDYQI* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2790 224 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 18 209 - -
Amo16g2790 224 Gene3D Protein tyrosine phosphatase superfamily 58 212 IPR029021 -
Amo16g2790 224 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 18 209 - -
Amo16g2790 224 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 72 209 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2790 Amo-Chr16 124004003 124005197 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2790 37 219 Protein tyrosine phosphatase (PTP) family AT3G10940 62.366 2.19e-75 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2790 - - gmx:100787079 253.832