Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2784 ATGGCAAAATTCAGAAAATCAATCACTCATTTTCTCAACATATCCTTCATATTCCTCCTAGTATTCCTTCTAATAAAACCTTCAAAAATTGATCCCGAAAGGCATTATAATTGGAAAAGTGCCCCTGCCATCAAGAACAGAAGATTCAACCATGCAAGGCTACTAAGCAGTGACATGAGTGTGGAAGGCTGCACAGACCTGCATACATTCTCCGATGACGCCGCGAAATGCTACTACGTCCAAACCCACGAAGATTGCAGATCAAAGGGTTACATAAACTACCTTCAAATCTTCTATTGCAGCCTGGGAAACTCCCCTGTTCTCGGCCACACACTACTAATCATGTGGCTCTCCGTCCTCTTCTACCTGCTCGGCGACACGGCTTCCAACTACTTCTGTAACAATTTGGAAGGGTTGTCCAAAATCTTAAGACTATCACCAACCATTGCAGGGGTCACCCTTCTCTCGCTAGGGAACGGTGCCCCCGATTTCTTCGCCAGCGTCGTCTCCTTCACCAAAACAAGCGATGGTGCTGTTGGTCTCAACAGCATTCTTGGTGGTGCTTTCTTTGTCTCGAGTGCTGTTATGGGAATCATAAGCATTCTTGTGAGCACAAAAGAGGTTGCGGTTGATAAAGCAAGTTTCATTAGAGATGTTATTTTCTTCCTTTTCTCACTCTTTGTCCTCTTAATCATCATCTCCATTGGGAAACTCTCCTTGTTGGGCTCAATCTGCTATGTTTCTATATATTTTCTTTATGTTTGTGCTGTTTCTGCCACACATTTTATCTATGGAGATGATAAACAAGAAGCTGGAGAATTTGCGGTTGTGTCCTCATCGGATGAATCGCTTGAATCTGGGATTCCGTTGTTGGGTTATGTTGATGATGAAAAACCAAACCACTTAGAGAAAGTTGTTGAAGAAACCAATGATGAAGAGCAACGACCAGTTTTTGATATTTTGAAACATGCGGAGAATAGGATATTTGACTGGAATAACTTGGGGAAGTTTCTACAAATTCTAGAGTTGCCACTTTCTCTACCAAGAAGGCTTACAATTCCAGTTGTGAACGATGAGAAGTGGTCCAAGCCATATGCAGTTATATCGGTGACACTGGCACCAGTTTTGTTGGCAACAGTTTACAACACCCAAAAGGAGAACGTGAGTTCAAGGAGCAGCTTAGTTACCTATTTAACCTCTTCATTAGTTGGAATAATTTTAGGTAACATGGCATGTGTGACCACAAAGAGTTGTAGCCCACCAAGGAGATGCTTGTTCCCTTGGTTATCTGGTGGATTTGTAATGAGTGTAACATGGACTTATCTAATTGCTGAGGAGCTTGTTTCACTATTGGTCTCAATTGGGAACATAATTGGGGTTAGCCCTTCAATTTTAGGGTTAACTGTCCTAGCTTGGGGTAATTCCCTTGGTGATTTGATAGCAAATGGTGCTATGGCTATGAATGGTGGGCCAGATGGGGCCCAAATGGCTATTTCTGGATGCTATGCTGGGCCTATGTTTAATACCTTAATGGGCTTGGGCTTGCCCCTTGTTCTCTCAGCATTGAATGATTACCCTGATCCTTATGTTATTCCTAAGGATACTTCATTGTATCAAACAATACTGTTCTTGATGGGAGGGGTTCTTTGGGCCCTTGTGATTTTGCCAAAGAAGAACATGAAGCTTGATAAATCCTTGGGGGTAGGACTTGTGACTATATACCTTTGCTTCTTGTTTATAAGGATCGCCATGGCTATTGGCGACTTGGCGTAG 1773 0.4264 MAKFRKSITHFLNISFIFLLVFLLIKPSKIDPERHYNWKSAPAIKNRRFNHARLLSSDMSVEGCTDLHTFSDDAAKCYYVQTHEDCRSKGYINYLQIFYCSLGNSPVLGHTLLIMWLSVLFYLLGDTASNYFCNNLEGLSKILRLSPTIAGVTLLSLGNGAPDFFASVVSFTKTSDGAVGLNSILGGAFFVSSAVMGIISILVSTKEVAVDKASFIRDVIFFLFSLFVLLIIISIGKLSLLGSICYVSIYFLYVCAVSATHFIYGDDKQEAGEFAVVSSSDESLESGIPLLGYVDDEKPNHLEKVVEETNDEEQRPVFDILKHAENRIFDWNNLGKFLQILELPLSLPRRLTIPVVNDEKWSKPYAVISVTLAPVLLATVYNTQKENVSSRSSLVTYLTSSLVGIILGNMACVTTKSCSPPRRCLFPWLSGGFVMSVTWTYLIAEELVSLLVSIGNIIGVSPSILGLTVLAWGNSLGDLIANGAMAMNGGPDGAQMAISGCYAGPMFNTLMGLGLPLVLSALNDYPDPYVIPKDTSLYQTILFLMGGVLWALVILPKKNMKLDKSLGVGLVTIYLCFLFIRIAMAIGDLA* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2784 590 PANTHER CATION/CALCIUM EXCHANGER 1 6 587 - -
Amo16g2784 590 Pfam Sodium/calcium exchanger protein 115 256 IPR004837 GO:0016021|GO:0055085
Amo16g2784 590 Pfam Sodium/calcium exchanger protein 431 582 IPR004837 GO:0016021|GO:0055085
Amo16g2784 590 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 6 587 - -
Amo16g2784 590 Gene3D - 365 583 IPR044880 -
Amo16g2784 590 Gene3D - 145 276 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2784 Amo-Chr16 123907851 123910432 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2784 67 589 Antiporters AT5G17860 51.418 2.06e-179 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2784 K13754 - gmx:100818583 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2784 16 123907851 123910432 Amo06g2103 06 76442638 76445202 hybridization