Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2782 ATGGTTTTCCAGGCATTTATAAATTTTTTAAGTTTAACTCCAACTTCCGCGTGTGGCAACTACTCATGCTGTTCCGTTCTCTTTTCTGTCTCCAAACGCATGGGTTATTCCACCTTGTTGCTCAACGCGTCTTTCCTCATCGTCTTCTCTGTTTTCCTTGTTCTTCATGTCAGCTCTCCTTCAGAACAGGTTCCTCTGAGAAAGTACCATTTTACCCTTGGTGACATTGATGAGAATGATGATTCTTGCAAGAGCTTTCACAGCCTCAGTGACAACGAAGCAAAGTGCTTGTACTTGAAATCCAATGACCCTTGTGTCACTGAGGGTTATGTTGATTATCTTTACCTTTTCTACTGCAAATTTGGGGATTTAGCTCTTTTTGGTCAAACCCTTTTGTTCCTTTGGCTATTGGTCTTGTTCTACCTTCTAGCTAACACTGCTTCTGAATACTTTTGTCCTTCCCTTGAGAGCCTCTCAAAATTGCTGAGATTGTCCCCAACAGTTGCTGGAGTAACCCTTCTTTCCCTTGGCAATGGTGCCTGTGATGTCTTTGCAACACTTGTTTCCTTCAATGGCAGTGGCACTGGAGGTATTGGATTCAACACTGTGCTTGGGGGTGCTTCCTTTGTGTCCTGCGTTGTGGTTGGGATTGTTAGCATATCGGTTAGGCATCGAGGAATTCGAGTTAAGAAGTCTGCATTGATAAGAGATGTCAGTTTTCTTCTCTTTGTGCTTGTGTGCTTGTTCGCGATCTTAATTGCCGGCGAGATCAATGTTATTGGGGCAATTAGCTTCTGTTTGATGTATGTTGTTTATGTGGTTATTGTCTACATCTCGTCGACCCGGTGGAAGGGTGACTCTAGCGACGGTCAATCGAGTAATGGCGACGATCCGTCCGTGCCCCTTATCATTGGAATGGAGAAAGGAGTAATTGGTAATGATGAAAATGGATCTCAAGAATGTAGGTTCAACTTTGAGGAGAAATTCTGCTTTAAGAAATCTCCAGTTTGTAGATTTTCACTTTGTGTCTTGGAGTTGCCACTTTACTTGCCAAGGAGATTGACAATTCCGGTTGTTTGTGAAGAGAGATGGTCCAAACCATATGCAATTCTGTCAGCCCTGTTATCACCATTGCTATTGTCTTCTCTCTGGACCCCGGGAAGCCTAACGGTCTATGGAACCGGATTATTAATCGGAATCATCTTAGCCGTAGCCGCATTCTTCACCACCGAGCCATCTAGTCCGCCGAAGAAGTACATGTTCCCTTGGCTTGCAGGGGGGTTTGTGATGAGTGTTACATGGAGTTACATTTCAGCTCAAGAACTGGTTGGATTGTTGGTCTCACTTGGTTACATATACGGAATTAGTCCTTCAATTTTGGGGCTAACAGTTCTTGCTTGGGGAAATTCAATTGGAGACTTAGTGACAAATTTGACTATGGCGTTACATGGTGGGACAGAAGGTGCTCAAATTGCAATATCAGGTTGTTATGCTGGCCCTATATTCAACACTGTGATTGGATTAGGCTTATCCCTTGCAAGTTCAACTTGGTCACAGTATCCAAATTCTGTTATTATACCAAAAGATCCATATCTTTGGGAAACACTAACACTTTTGGTAATTGGATTGATTTGGGCACTTTTGGTGTTGGTAAGAAGGGATATGAAGCTTGATTCACTCTTAGGGGGAGGGCTTCTTGCCGTTTACTTCATTTCATTGTTTCTGAGGCTGATTCAGACATTAGGGACTTGCCAATTTCAGGATATATTACCAAAATGA 1779 0.4289 MVFQAFINFLSLTPTSACGNYSCCSVLFSVSKRMGYSTLLLNASFLIVFSVFLVLHVSSPSEQVPLRKYHFTLGDIDENDDSCKSFHSLSDNEAKCLYLKSNDPCVTEGYVDYLYLFYCKFGDLALFGQTLLFLWLLVLFYLLANTASEYFCPSLESLSKLLRLSPTVAGVTLLSLGNGACDVFATLVSFNGSGTGGIGFNTVLGGASFVSCVVVGIVSISVRHRGIRVKKSALIRDVSFLLFVLVCLFAILIAGEINVIGAISFCLMYVVYVVIVYISSTRWKGDSSDGQSSNGDDPSVPLIIGMEKGVIGNDENGSQECRFNFEEKFCFKKSPVCRFSLCVLELPLYLPRRLTIPVVCEERWSKPYAILSALLSPLLLSSLWTPGSLTVYGTGLLIGIILAVAAFFTTEPSSPPKKYMFPWLAGGFVMSVTWSYISAQELVGLLVSLGYIYGISPSILGLTVLAWGNSIGDLVTNLTMALHGGTEGAQIAISGCYAGPIFNTVIGLGLSLASSTWSQYPNSVIIPKDPYLWETLTLLVIGLIWALLVLVRRDMKLDSLLGGGLLAVYFISLFLRLIQTLGTCQFQDILPK* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2782 592 Gene3D - 164 304 IPR044880 -
Amo16g2782 592 Gene3D - 370 577 IPR044880 -
Amo16g2782 592 Pfam Sodium/calcium exchanger protein 424 576 IPR004837 GO:0016021|GO:0055085
Amo16g2782 592 Pfam Sodium/calcium exchanger protein 133 277 IPR004837 GO:0016021|GO:0055085
Amo16g2782 592 PANTHER CATION CALCIUM EXCHANGER 28 585 - -
Amo16g2782 592 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 28 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2782 Amo-Chr16 123886158 123889149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2782 31 585 Antiporters AT5G17850 51.309 2.77e-160 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2782 K13754 - gmx:100787016 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2782 16 123886158 123889149 Amo06g2102 06 76382828 76385201 hybridization