Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2752 ATGGAAGAGCAAGGGCAGCAACACCATCAAGACCCAAACAGAAGCCATAGCCATGGTGCTGGTGGTTCTTCCTCTTCCTCTGAGAAGCAGAGTAGCGAACCGGTGCGCTCAAGATGGACGCCCAAACCGGAGCAAATACTTATTCTTGAATCCATCTTCAACAGCGGCATGGTTAACCCTCCAAAGGACGAGACCGTCAGGATAAGGAAGCTTCTAGAGAAGTTTGGGGCTGTCGGCGACGCTAACGTTTTCTACTGGTTCCAGAACCGTAGGTCCAGATCTCGTCGCCGACAGCGCCAGATTCAGCAGCAGCAGCAGCAACAACAACACCACCAACACCAGCTAGGTGTTGGTGTTGTTGGGGTTGGTGTTGGTGTTGGTGGTGCAATTCAGTGTGATCAAGATCACCCTGGTCAACCTGCACTCTCAGTAGGGAGTGCTTTGGGTTTCGGAGGTTCTTCTTCTTTCGGAGATTCTTCTTCTTGTTCTTTTCATCTTCCTCCTCCTCCGACTGGTGCCGGTGGCGGTTCTTCTTCTTCATCTTCCTTCGGTGGTGAGCAAGAAGCCATGGATAACTTCTTCTCTGGATTCATCACAGTGTTCATCAATGGAATTGCAACAGAAGTTCCAAGAGGTCTTATAGACATCAAAACATTGTTTGGTGAAGATGCAATTTTAGTTCATTCTTCTGGAGTGCCACTTCCAACCAATGAGTTTGGCTTCTTAATGCAGACCTTGCAGCATGGTGAAAGCTACTTTCTGGAAGAAAGAGTAGGGCGTGGGGAATTAACAAAGAAAAGTTGA 804 0.4838 MEEQGQQHHQDPNRSHSHGAGGSSSSSEKQSSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQIQQQQQQQQHHQHQLGVGVVGVGVGVGGAIQCDQDHPGQPALSVGSALGFGGSSSFGDSSSCSFHLPPPPTGAGGGSSSSSSFGGEQEAMDNFFSGFITVFINGIATEVPRGLIDIKTLFGEDAILVHSSGVPLPTNEFGFLMQTLQHGESYFLEERVGRGELTKKS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2752 267 MobiDBLite consensus disorder prediction 95 114 - -
Amo16g2752 267 MobiDBLite consensus disorder prediction 159 184 - -
Amo16g2752 267 Pfam Homeodomain 36 96 IPR001356 GO:0003677
Amo16g2752 267 MobiDBLite consensus disorder prediction 1 41 - -
Amo16g2752 267 SUPERFAMILY Homeodomain-like 32 102 IPR009057 -
Amo16g2752 267 MobiDBLite consensus disorder prediction 1 15 - -
Amo16g2752 267 MobiDBLite consensus disorder prediction 16 38 - -
Amo16g2752 267 PANTHER WUSCHEL-RELATED HOMEOBOX 11 7 254 IPR044558 GO:0003700|GO:0048830
Amo16g2752 267 ProSiteProfiles 'Homeobox' domain profile. 32 97 IPR001356 GO:0003677
Amo16g2752 267 SMART HOX_1 34 101 IPR001356 GO:0003677
Amo16g2752 267 Gene3D - 22 115 - -
Amo16g2752 267 MobiDBLite consensus disorder prediction 99 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2752 Amo-Chr16 122278130 122282173 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2752 10 254 Wox Gene Family AT3G03660 49.110 7.24e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Amo16g2752 Homeodomain 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2752 - - adu:107494279 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2752 16 122278130 122282173 Amo16g2752 16 122278130 122282173 ECH