Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2740 ATGACGTCTTCGAAGGACAAGGGTAAGAGAAAGCTACCGATGGATCAAGGTACCACACAAAACTACAAGTTGAGGTTTTTGAAGCCAGTAATAAGGCCATCAATGTTCAAACTGTCATTACCTATAACTCCGGATGAGCTCCCAAACCGTATCCCGTACCTGGACCTGGTTGTGCCTGACGGAAGGAATAACCCCTTTCGGTCGCAACTCCAAAGTGGCAAAATTGCATTGACTCGTGGCTGGCAGGAGTTCTACCAGATGTACAAAATCAATCTGGACTCCTTGCTCTATTTCACACACAAACGAAACTCCAATTTCCAAGTCCGGATATTTGATTTTTGTGGCATTGAGAATTCATACCAACTCCGTGATCCTGAAGAACCACCATATGTAAGGACTGGTGACTATCAAATTGCAAAGTGTATCAACATCCCTCCTTCAGCCAATGCTAAAGCCGTTGCCGCTAAGCCGAATGTCCCTCATCTCAGTCACTTCACTGGATGGGAGAACTTTGCTTCATTGTGCAACTTCAAGCCAGGTGGTGTGGGGATCTTCGAGGTGATATCCACTGAGCCAGTGACGATCATGCAGGATGTATGA 600 0.46 MTSSKDKGKRKLPMDQGTTQNYKLRFLKPVIRPSMFKLSLPITPDELPNRIPYLDLVVPDGRNNPFRSQLQSGKIALTRGWQEFYQMYKINLDSLLYFTHKRNSNFQVRIFDFCGIENSYQLRDPEEPPYVRTGDYQIAKCINIPPSANAKAVAAKPNVPHLSHFTGWENFASLCNFKPGGVGIFEVISTEPVTIMQDV* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2740 199 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 56 126 - -
Amo16g2740 199 PANTHER B3 DOMAIN-CONTAINING 56 126 - -
Amo16g2740 199 Gene3D - 18 114 IPR015300 -
Amo16g2740 199 SUPERFAMILY DNA-binding pseudobarrel domain 52 112 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2740 Amo-Chr16 121322150 121324491 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2740 36 122 B3 DNA Binding Superfamily AT4G01580 31.000 1.84e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2740 - - adu:107488680 312.383