Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2733 ATGGCGACAAGAAAGGAAGAAGAGAGGAACGAGAAAATCATCAGAGGTCTCATGAAGCTTCCGCCCAATCGAAAATGCATCAACTGTAACAGTCTGGGCCCGCAATATGTTTGTACCAACTTTTGGACCTTCGTTTGCATGACTTGCAGTGGAATCCATCGTGAGTTTACCCATCGTGTGAAGTCTGTATCTATGGCAAAGTTCACATCACAGGAAGTTGATTCTCTTCAGAATGCGGGTAACCAGCGTGCACGGGAAATATATTTGAAAAATTGGGACTTCCAGAGGCAACGGCTGCCAGATAGCAGCAATGTCGATAAAATAAGGGAGTTTATCAGGCACGTATACGTCGATCGAAGATATGCTGCAACCAAATCTTCTGACAAGCCTCCAAGAGATATGCAGAACCCTAGAATCAATGAAGATGATACACGGCGTGCTAGTTCTTATCACTCCTATTCACAAAGCCCTCCATATGATTACCAATACGAAGATCGACGGTATGGGAAACAAGCAGCTGCATTGACCAGGAAGCCTGGTTCAGATAAAGTTCGCTATGAAGGAAAGATGAGTAGTATTATCTATAGTCCTGGACGCTTCAGTGATCATGCCTATGAGGATAGATTTGCCAATGAGGGATCTGGTCCGAGAATTTCTGACTTTTCTGTGTCTAGTGGGGGTGAGCAATTCAAATCTGAGGTTCAGTCTCCCAACTTTCATAAGGATATTGGATTTCATAGTCCACCCTATCGGCATTCAGGTCACCATTCAAGTGAAGATGTCTGGGCTTTTGCAAGGAATACATCTCTGGAAACTAATGCTAAGAGAGATATGGAAGGAATTCGGCTTCCACAGAGGACTGCTTCACTGGGATCAATGGACAGCAACCTGTCATCTTTCAGATCTCACAATTCTGGTGGTTTAGTTGATTTTTTCTCTGAACCTGTCCAAGCTTTTGAACCGCTACAGACTAAAGTTTCTTGTGTTCCCCAACCACCTGGTCCAGCAGGTTCTACTAGCTCTGATATTTCCAACGCACCTGTTGCAGCAGAACCATCCATTGATCTTTTTCAGTTGCCAGGAGCACCCTCTCAGTCTACATCAGTGGATCTGTTTCAAGCATCTGTTTTGTCTGCAGTTCCATATTCCAATGAGAGTCAACCAACACAAACTTCCCAACCTTCATCAGTTGACTTTTTTGCAGACCTTTCTCAGCAGCCATCAACTGCAACCTCAGATGAAAAGTCATTGGAGTTATCTGCCCCTAAAAATGAAGGTTGGGCAACATTTGATATGCCTCAGTACACAGCATCTACTGCAAAAGTTGAAACTCCAGCAGTACTGCCATCAACTGCTGACACATTGCAGGACAGATTTGATCCATTCTTGAACTTGAATGGAGATATGCAATGGCCTTCATTTGAAACTTCTGGTGTTAGTGTTCCTTCTTCAGTTACATCTAATGTATGGCATGATGGTGCATGGAATGGAGAAGAACAAGTTTCTGTGACAGCAACAAGCACTCAACCTTGGAGTGCATTTGAAGATTCTGTTACCCCGGCTTCTGCGGATGGCCTTAATCAGGGATTACAACTGCAAAATCTTCCATCAACTGATGATCAATATTTGGATTTAAGAGCTTCTGAGGGGTGCAATGAAGGTGGGATGCAAGGCATTGCCCCTATTGGCGGGTTTGATGATCATGAAATCTCATCAAATTTTAGTGGTGGCTCAGCATATCCTCCCTCTGCAATTCCTCCTATGGGAGAGAGTCAACCTAATGGAAACAGTCATAAATCAACTAATCCATTTGATTTTCTTGATGATGCTGATGTATCAGATGTAGAGCACGGTAATATGTTTCTTGATCTTAGCTCATTGCAAGCTGCTCTGCCCGATGCGCAGTTTCAACCCACTTTCCATAGTGGTATTGCCGAACCATGGCTTCCTCAAAATTCAGTTAACTCCTACATCTCCTCTGCTGGACAAGGTGGTGGTTTGACATTCTTGGCTGCTCAACCGCCAAGTTCTCAAATATCGAATATCCAGACGCAGGAACCGGTTGCATCTTTTGGGGGAAATCCTTTTGCATAA 2094 0.4389 MATRKEEERNEKIIRGLMKLPPNRKCINCNSLGPQYVCTNFWTFVCMTCSGIHREFTHRVKSVSMAKFTSQEVDSLQNAGNQRAREIYLKNWDFQRQRLPDSSNVDKIREFIRHVYVDRRYAATKSSDKPPRDMQNPRINEDDTRRASSYHSYSQSPPYDYQYEDRRYGKQAAALTRKPGSDKVRYEGKMSSIIYSPGRFSDHAYEDRFANEGSGPRISDFSVSSGGEQFKSEVQSPNFHKDIGFHSPPYRHSGHHSSEDVWAFARNTSLETNAKRDMEGIRLPQRTASLGSMDSNLSSFRSHNSGGLVDFFSEPVQAFEPLQTKVSCVPQPPGPAGSTSSDISNAPVAAEPSIDLFQLPGAPSQSTSVDLFQASVLSAVPYSNESQPTQTSQPSSVDFFADLSQQPSTATSDEKSLELSAPKNEGWATFDMPQYTASTAKVETPAVLPSTADTLQDRFDPFLNLNGDMQWPSFETSGVSVPSSVTSNVWHDGAWNGEEQVSVTATSTQPWSAFEDSVTPASADGLNQGLQLQNLPSTDDQYLDLRASEGCNEGGMQGIAPIGGFDDHEISSNFSGGSAYPPSAIPPMGESQPNGNSHKSTNPFDFLDDADVSDVEHGNMFLDLSSLQAALPDAQFQPTFHSGIAEPWLPQNSVNSYISSAGQGGGLTFLAAQPPSSQISNIQTQEPVASFGGNPFA* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2733 697 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
Amo16g2733 697 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD14-RELATED 1 697 - -
Amo16g2733 697 MobiDBLite consensus disorder prediction 122 148 - -
Amo16g2733 697 PANTHER ARFGAP/RECO-RELATED 1 697 IPR044820 GO:0005096
Amo16g2733 697 Pfam Putative GTPase activating protein for Arf 12 123 IPR001164 GO:0005096
Amo16g2733 697 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Amo16g2733 697 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Amo16g2733 697 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Amo16g2733 697 CDD ArfGap_AGFG 11 123 - -
Amo16g2733 697 SMART arf_gap_3 11 129 IPR001164 GO:0005096
Amo16g2733 697 SUPERFAMILY ArfGap/RecO-like zinc finger 9 122 IPR037278 -
Amo16g2733 697 Gene3D Arf GTPase activating protein 1 132 IPR038508 -
Amo16g2733 697 MobiDBLite consensus disorder prediction 122 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2733 Amo-Chr16 121003467 121010429 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2733 14 116 C2H2 Transcription Factor Family AT4G05330 34.211 1.08e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2733 K15044 - gmx:100794964 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2733 16 121003467 121010429 Amo16g2733 16 121003467 121010429 ECH