Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2725 ATGAATTTGAATCTAACGAAGTTCCTGAGACGCTCAGGTGTAGATCAGAACTTTTTTGGGTGTATTTTTGCGAGAAGTGTGGGTCCTCTCTCTGTTGTTGATGACCAGTTTGTTCCGAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGCTGCAGGTTTTTCTACAAGAGTTCGGAGCACAAATAGGAAGGGAAACGAGATTAAGAATCAATTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACCAATCCGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCCTGCTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAGAGAACTAAGCATGTCCATTCGTCGTACAATAGAGAATAACGAGGAGGCC 495 0.4303 MNLNLTKFLRRSGVDQNFFGCIFARSVGPLSVVDDQFVPKVGMTFTTLEDAGKFYRNYAKAAGFSTRVRSTNRKGNEIKNQLITCSREGKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHRELSMSIRRTIENNEEA 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2725 165 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 36 157 - -
Amo16g2725 165 Pfam FAR1 DNA-binding domain 53 138 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2725 Amo-Chr16 120499130 120500021 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g2725 FAR1 5.3e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2725 - - adu:110278638 274.633