Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2696 ATGTTGACAAAGGTGTTCGCACCACACGTGCCACACGGGTGGGATCCAACACGTAGGGTAACGACAACGTCCGTTTTGAAACGCCGCCGTCTGTTCAACGCTGAGGCTCCTCAACAAATTTCCCTCGACTTTCTCCCCAAAATTGGTGACACAGCTCTTCACACTTCGGAAGCTCCTCCTCCCTCCTCGGGCGATTCGATTCGTCTTCCTCTTGTTTATCGGTTTTCTTCGATCTCTCCTCAAACCCTCTTAAATCCCCTCCGCGCTCGGATTCGCTTCTACAATTTTGAGTCTCTAGCAACTATGTATCACGCGAAGAAGTTCTCGTCTGCAACGATGGTGCCGCATAAACCTCAAGGTGGTGGCGAACAAGTTGGAAATGTTGGGGTTTTGGATGGATCTGCGGTGAGGAATGCGGGACCTGCTAGTTCTGGTGGAAATGGGAAGCAGCGTTTGCGATGGACATCTGATCTTCATGATCGTTTTGTGGATGCCATTACGCAACTTGGTGGACCAGATAGAGCAACGCCAAAAGGTGTTCTGCGAGTGATGGGTGTACCTGGACTTACTATTTATCATGTTAAAAGCCATTTACAGAAATATCGTCTTGCAAAGTACTTGCCTGATTCTCCAGCTGATGGTAAAGACTCTAAAGATGAAAAAAGGACACCTGGAGACACTGTTACTGGCATAGATTCTTCTCAGGGGTTGCAAATCAATGATGCTCTAAGAATGCAGATGGAGGTTCAGAAACGTCTTCATGAACAGCTTGAGGTGCAAAAGCAGTTACAAATGAGAATCGAAGCGCAGGGGAAATACTTGCAGAAGATCATAGAGGAACAGCAGAAATTAGGGAGTACCTTGACAAATTCAGACACATTGCCATTGTCCCACGATAAGCAAAATAATCCCCCGTCAGAGCCTTCTGGATCAAGCGATGCCATCGCAGATTCCATGTCTCCACTCAAAAAACAGAGAATCGATGATGGTTCAAAGGATGGCTTTGCTGTTTCTCAGGTGACAACAAAGACTTCACAAAAGACTGATTGTAGTGTTGATCAGTTGGACTCATGA 1074 0.4655 MLTKVFAPHVPHGWDPTRRVTTTSVLKRRRLFNAEAPQQISLDFLPKIGDTALHTSEAPPPSSGDSIRLPLVYRFSSISPQTLLNPLRARIRFYNFESLATMYHAKKFSSATMVPHKPQGGGEQVGNVGVLDGSAVRNAGPASSGGNGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPDSPADGKDSKDEKRTPGDTVTGIDSSQGLQINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGSTLTNSDTLPLSHDKQNNPPSEPSGSSDAIADSMSPLKKQRIDDGSKDGFAVSQVTTKTSQKTDCSVDQLDS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2696 357 MobiDBLite consensus disorder prediction 288 318 - -
Amo16g2696 357 MobiDBLite consensus disorder prediction 335 357 - -
Amo16g2696 357 Gene3D - 148 207 - -
Amo16g2696 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 146 206 IPR017930 -
Amo16g2696 357 Pfam Myb-like DNA-binding domain 152 202 IPR001005 -
Amo16g2696 357 SUPERFAMILY Homeodomain-like 149 203 IPR009057 -
Amo16g2696 357 MobiDBLite consensus disorder prediction 288 357 - -
Amo16g2696 357 Coils Coil 240 260 - -
Amo16g2696 357 PANTHER OS05G0491500 PROTEIN 103 343 - -
Amo16g2696 357 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 149 204 IPR006447 GO:0003677
Amo16g2696 357 Pfam MYB-CC type transfactor, LHEQLE motif 237 283 IPR025756 -
Amo16g2696 357 MobiDBLite consensus disorder prediction 209 226 - -
Amo16g2696 357 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 103 343 IPR044848 GO:0003700
Amo16g2696 357 MobiDBLite consensus disorder prediction 208 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2696 Amo-Chr16 119241288 119244873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2696 136 281 G2-like Transcription Factor Family AT4G28610 56.849 9.11e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo16g2696 Myb_DNA-binding 3.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2696 - - gmx:100783132 400.593