Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2632 ATGGACCACCAGTACCGCCACGTCATCAGTGCCGGAGCCAGCGATCCCATGCTCCGCACCTCCACTCTACGCACCACCACCTTCTCCTTCCCCCTAGCTCGCTACACCACCCGCCTCATCGCAGCCGACCGCCGCCGCATGCTCCTCGCTGACTGCGCTGACCGCCGATCCGACGACGGCCTCGACKCTTCCGACGATGACGATGGCGGAGGATGCGCGTACTCCAGGCCCGTCCTCGTGTTGGACTTGGTGTGGAACCTGGCTTTCGTCGTCGTGGCTGCCGGCGTGCTCCTCTCCACGCTCCGGGAGCGGCCRGCGACGCCRCTGAGGCTGTGGCTCTGTGGCTACGCGTTCGAGTGCGTGCTCCATATTTGCTTCGTGTTCTTCGAGTATCGCAGGAGAATCGGGGATCCTTCGCTGTCTCAGAGTCCGTACAGCATCCTGAAGAGGTTAGAGCCGGTGAACACTCTGGCATCATCTGTCTGGTGGGTGTTTGGATTTTATTGGATTGTTGTGGGCGGCCAAGCACTACTGGAAGATTCTCCGCAACTTTACTGGTTAACAGTGGTGTTTCTAGCCTTTGATGTATTTTTTATTATCTTTTGCATTGGGATGGCATGTATAATTTTCTTTGCYCTCTTTTGCCTTATCCCAATAATAGCATTAGCTTATGCTATAAGAATCAGGGAAGGTGCATCAGAAGAGGATATTAGGTCACTTCCTAAGTATAGGTTTGGCCAATCAAATTTGTTAGTGTTGGTTGATGACAAGAAGAAGCAAATTGTAAAAGCAGAATCGGATTCATACAATGAAAATCATATCAGTGAACTTTTTCTCGAACCAGATGATTCTGAATGCTGCATCTGCCTATCCCCYTATGTTGATGGAGCAGAACTGTATCGCCTCCCCTGTACCCATCATTTCCACTGTGGATGCATCAGCCGCTGGCTCCGGACAAAAGCAACTTGCCCRCTCTGCAAATTCAATATCCTTAGAGGCGATACTCTTGGCAACAACCGTCTGCAGGGAACCATCATTAGCAAAATCTGCAAAATCAAGCAGCTGAGTGAGTTGTACATAACTGAGAACAAGCTAATTTTCGGAGAGGTTCCAACTTGCTTTGGTAATCTTACTTCTCTAAGAAAATTTTACTTGAACTCCAACAAACTCAGTAAGGTGCCTTCTTCTCTTTGGAGCCTCAGAGACATTCTTGAGGTGAACTTGTCTGACAATGCTTTAATTCTGTCTCTTCCAATTGAAATTGGGAACTTAAAGGTTGTGACTTTCTTGGATCTATCAAAGAATATGATCTCAGGAAGCATTCCTGGGGCCATTTCTAGATTGCAAAATTTGCAAATTTTCAACTTATCACAAAATAAATTGGTAGGGTTTGACAGATTTGGACTTATCTCAAAACAACTTGTTTGGCTTGATTCCAAGATCACTGGAGAGAGATTCCGAGTGGTAGACCTTTCAAAAATTTCACTGCTCAATCTTTCATGTTTAATAAAGCACTTTGTGAAAATGCCAGATTACAAGTCCCAGCATGCAGTAAAAAAGAATGGTGGTGATACTAATGAAGGAACATTATCAGCATTACCAGCAGCCAGAATGATTTCGTACTATGAACTATCACAGGCAACTAATGGATTTGATGAGAGTAATTTGCTTGGTAGGGGCAGTTTTGGCTCTATGTTCAAAGGTTTACTTTCAAATGGGATGCTGGTTGCTGTCAAAGTGTTTAACTTGGACTTAGAATTAGGATCAAAGAACTTCAGTGTAGAATGCGAAGCAATGCTCAATCTGCGCCATCGAAATCTCATGAAGATCATAGGTTGTTGTTCAAGTATAGATTACAAGCTTTTAGTGATGGAGTTCATGCCTAATGGGAGCCTTGAGAGATGGTTGTATTCTCATAATCATTGTTTGGACTTCTTGCAAAGGCTAAATATAATGATAAATGTGGCATCTGCATTGGAGTATCTGCATCATGGATCTTCACCTATAGTGGTTTATTGTGATGTCAAACCTTGTAATGTCTTATTGGATGAAGACATGGTTGGCCATGTCAGTGACTTTGGCATTGCCAAATTGCTTGGCGAGGGACAATCCAAAGAATATACCAAGACCATGGCTACAGTTGGCTACATTGCACCGGAGTTTGGATCCAAAGGGATTATCTCTACAAAGGGAGATGTATACAGTTTGGGGATAATGCTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGACTTGTTTGTTGCAGGATTAAGCATGAAAGGTTGGATTAGTGAATCATTGTCACGAGCAATTGATCAAGTTGTGGATTCTAACTTTTTACAAGATGAAGGTCACCACCATGTTGATGACATAATAGCATCTACATCATCTATCTTGAAACCGGCCTTAAATTGTTGTGAGGATTTACCTGAAGAACGAATGAACATGACAGATATTGCTGCATCACTAAACAAAGTTAAGGCCAAGTTTTTTGAAGCTAGTGATAAGAATGTGGTTCGGTTTTGTAGAAAATGA 2538 0.4366 MDHQYRHVISAGASDPMLRTSTLRTTTFSFPLARYTTRLIAADRRRMLLADCADRRSDDGLDXSDDDDGGGCAYSRPVLVLDLVWNLAFVVVAAGVLLSTLRERPATPLRLWLCGYAFECVLHICFVFFEYRRRIGDPSLSQSPYSILKRLEPVNTLASSVWWVFGFYWIVVGGQALLEDSPQLYWLTVVFLAFDVFFIIFCIGMACIIFFALFCLIPIIALAYAIRIREGASEEDIRSLPKYRFGQSNLLVLVDDKKKQIVKAESDSYNENHISELFLEPDDSECCICLSPYVDGAELYRLPCTHHFHCGCISRWLRTKATCPLCKFNILRGDTLGNNRLQGTIISKICKIKQLSELYITENKLIFGEVPTCFGNLTSLRKFYLNSNKLSKVPSSLWSLRDILEVNLSDNALILSLPIEIGNLKVVTFLDLSKNMISGSIPGAISRLQNLQIFNLSQNKLVGFDRFGLISKQLVWLDSKITGERFRVVDLSKISLLNLSCLIKHFVKMPDYKSQHAVKKNGGDTNEGTLSALPAARMISYYELSQATNGFDESNLLGRGSFGSMFKGLLSNGMLVAVKVFNLDLELGSKNFSVECEAMLNLRHRNLMKIIGCCSSIDYKLLVMEFMPNGSLERWLYSHNHCLDFLQRLNIMINVASALEYLHHGSSPIVVYCDVKPCNVLLDEDMVGHVSDFGIAKLLGEGQSKEYTKTMATVGYIAPEFGSKGIISTKGDVYSLGIMLMETFTRKKPTDDLFVAGLSMKGWISESLSRAIDQVVDSNFLQDEGHHHVDDIIASTSSILKPALNCCEDLPEERMNMTDIAASLNKVKAKFFEASDKNVVRFCRK* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2632 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 670 682 IPR008271 GO:0004672|GO:0006468
Amo16g2632 845 SUPERFAMILY L domain-like 336 478 - -
Amo16g2632 845 SMART serkin_6 551 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g2632 845 Gene3D Transferase(Phosphotransferase) domain 1 627 842 - -
Amo16g2632 845 SUPERFAMILY RING/U-box 278 332 - -
Amo16g2632 845 ProSiteProfiles Zinc finger RING-type profile. 286 327 IPR001841 -
Amo16g2632 845 ProSiteProfiles Protein kinase domain profile. 551 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g2632 845 PANTHER RECEPTOR-LIKE PROTEIN 55 330 463 - -
Amo16g2632 845 Pfam Protein kinase domain 552 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g2632 845 SMART ring_2 286 326 IPR001841 -
Amo16g2632 845 CDD RING-H2_RNF111_like 285 329 - -
Amo16g2632 845 SUPERFAMILY Protein kinase-like (PK-like) 532 824 IPR011009 -
Amo16g2632 845 PANTHER RECEPTOR-LIKE PROTEIN 55 514 832 - -
Amo16g2632 845 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 514 832 - -
Amo16g2632 845 Gene3D Ribonuclease Inhibitor 324 501 IPR032675 -
Amo16g2632 845 Pfam Ring finger domain 285 327 IPR001841 -
Amo16g2632 845 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 280 323 IPR013083 -
Amo16g2632 845 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 330 463 - -
Amo16g2632 845 Gene3D Phosphorylase Kinase; domain 1 513 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2632 Amo-Chr16 116001498 116009771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2632 13 334 C3H Transcription Factor Family AT1G68070 44.186 4.15e-87 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo16g2632 Pkinase 6.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2632 - K13420 aip:107647131 679.478