Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2623 ATGGAAAATTTAGTTGATAACGAAGGAGATGTAAATGATCGTTGCGAAACAATGAAGAAGGTGAGGAATAAGATCGGCAAGTATGAGGTTGGTAGAACCATCGGCGAAGGTACATTTGCCAAGGTCAAATTCGCTAAGAACACCGACACCGGAGACAGCGTTGCCATTAAGGTCATGGCTAAATCCATCATTCTCAAGCATAGATTGGTTGAACAGATATCCATTATGAAAATTGTCAGACATCCAAATATAGTTAGGTTGCATGAGGTTTCGACCAGCAAGACCAAGATCTACATAATTCTTGAGTTCGTAATGGGAGGAAAATTATATGATAAAATTGCTCAACAGAATAAGCTTTCTGAAAATGATTCTAGGCACTACTTTCAACAACTTATAGATGTTGTTGCTCATTGTCACAAGAAGGGTGTGTATCACAGAGACTTCAAGCCTGAAAACCTTCTTGATGCATTCGAAAACTTGAAAGGTGTTGATGTTCTCCACACGACATGTGGGACCCCAAATTATGTTGCACCTGAGGTGCTAGGCAATCAAGGTTATGATGGTGCAGCAGCTGATGTTTGGTCATGTGGAGTCATCCTGTATGTTTTGATGGCTAGATATCTTCTTTTTGAGGAGGCTGACCTTCCTGCACTGTACAACAGAGTATTTTTCCTCTGCCTCTCCTTAGCTTGA 693 0.4084 MENLVDNEGDVNDRCETMKKVRNKIGKYEVGRTIGEGTFAKVKFAKNTDTGDSVAIKVMAKSIILKHRLVEQISIMKIVRHPNIVRLHEVSTSKTKIYIILEFVMGGKLYDKIAQQNKLSENDSRHYFQQLIDVVAHCHKKGVYHRDFKPENLLDAFENLKGVDVLHTTCGTPNYVAPEVLGNQGYDGAAADVWSCGVILYVLMARYLLFEEADLPALYNRVFFLCLSLA* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2623 230 PANTHER SERINE/THREONINE KINASE 24 222 - -
Amo16g2623 230 ProSiteProfiles Protein kinase domain profile. 28 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g2623 230 Pfam Protein kinase domain 28 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g2623 230 SUPERFAMILY Protein kinase-like (PK-like) 17 225 IPR011009 -
Amo16g2623 230 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 8 24 222 - -
Amo16g2623 230 ProSitePatterns Protein kinases ATP-binding region signature. 34 66 IPR017441 GO:0005524
Amo16g2623 230 Gene3D Transferase(Phosphotransferase) domain 1 18 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2623 Amo-Chr16 115692249 115694214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2623 18 222 CBL-interacting serine-threonine protein kinases AT5G35410 66.667 2.50e-104 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo16g2623 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2623 - - gmx:100811380 338.576