Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2620 ATGGCTGATGGAGACTCTTCACCACTGAAAACCACCCAAAACGGGCATCATCAGACAGGGCTTATAGGAAAATCTCTGATTGAGTTCCAGTCTACAAAAGGAGATGTTCTTCCTGCACACAAGAATCAGAGCCAGTGCTTAGCAGATCTATGTGGCGTATTGCACTGTGACATTGAAATCAATTTTGGGTTGAAAAAACCAAAATGTAATCCTACTGCCGCTGCAAGAAATAAACATCTGTGCGAGGTCAGAAAGTGGGAAGCAGCGAATAATTTTGATGGACCAAGAATTTCAAGAAGCAAGTATATTGCCATCATTACTAAGAAGCTCAAGAAAGAATGA 342 0.4123 MADGDSSPLKTTQNGHHQTGLIGKSLIEFQSTKGDVLPAHKNQSQCLADLCGVLHCDIEINFGLKKPKCNPTAAARNKHLCEVRKWEAANNFDGPRISRSKYIAIITKKLKKE* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2620 113 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 42 83 - -
Amo16g2620 113 PANTHER ZINC FINGER PROTEIN-RELATED 42 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2620 Amo-Chr16 115625310 115626771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2620 29 96 C2H2 Transcription Factor Family AT5G40710 43.421 2.20e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2620 - - aip:107617894 168.318