Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2617 ATGCTGGCCTTTAAGCCTAAAGATCGGCCTTCTGCTGAAGAGGCGTTAGCGGATCCATATTTTAAAGGCTCGGCCAAGGTTGAGAGAGAACCTTCTGCCCAACCAGTTACAAAGATGGAATTTGAGTTTGAGAGACGCAGGATAACAAAGGAAGATGTACAAGAACCTATATACCATGAGATTCTAGAGTATTATCCAAAAATGTTAAAAGAATTTCTAAAGGGAGCAGAGCCAACAGGTTTCATGTATCCTAGTGCTCTGGACCACTTCAAGAAACAATTTACATATCTTGAGGAGCATTACAACAAAGGTGGAACTGTTATTCCACCGGAGAGGCAACATGCATCTTTACCTAGGTATATTAATTTTGTTTATACTTGGAAGATGTTGCTTTGGAAATATGGGGCAACAGTTACTTATGTTGAGGGTGGCAGGGCTGCTCTTCAGATGCTTAAGCCACTGCACAATTTCGATGCAGGTTTCATGGATCTCCAAATGCCAGAAATGGATGGGTAA 516 0.4167 MLAFKPKDRPSAEEALADPYFKGSAKVEREPSAQPVTKMEFEFERRRITKEDVQEPIYHEILEYYPKMLKEFLKGAEPTGFMYPSALDHFKKQFTYLEEHYNKGGTVIPPERQHASLPRYINFVYTWKMLLWKYGATVTYVEGGRAALQMLKPLHNFDAGFMDLQMPEMDG* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2617 171 SUPERFAMILY CheY-like 125 171 IPR011006 -
Amo16g2617 171 SUPERFAMILY Protein kinase-like (PK-like) 1 66 IPR011009 -
Amo16g2617 171 Gene3D Phosphorylase Kinase; domain 1 45 66 - -
Amo16g2617 171 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 117 - -
Amo16g2617 171 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 117 - -
Amo16g2617 171 Gene3D Transferase(Phosphotransferase) domain 1 1 44 - -
Amo16g2617 171 Gene3D - 122 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2617 Amo-Chr16 115443738 115445108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2617 1 119 MAP Kinase Gene Family AT5G19010 79.167 1.07e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2617 - K04371 gmx:100814013 223.016