Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2610 ATGACGGCTTGTTTAAGTAGTTTGTCGGCCGAATCGTCCAGTACCCGAGCGAAGCGCAGCAACGGGTTCCATAACAGGAGTCTCAGATCAGGACCAGTCGTGCTATACTGTACGCAGATCACACCGCAATCGGAGTCGATAACAGTCCACCATCCGCGGGGGCCGAGTTGTTCTGGCATTGGCGCGGCCACTATTCCTCCGTCTACACAGTCCACAATACAGAAAGATTCCTTTGAACTGTACGTCTCCGGGTCACCAATCTGGAGCAACACCTTACGGTGTTTCCCGATGTTCGCGAGCGTGTTGTCTCTCCTAAATCTGTCAGAAGACAGTCGGACACGCCAGGTTGTGCTTGCGGTTCTGCATCTCGCCGCCGTCTTCGGTGAGACAGACTATCCACAACAGGGGCAATCGAATAAGCATTTAAAGGAACCGTATATTATACACTTTCTCACATTTGCTACATTGTATAGTCGTCGACCGCGTAGAGTTGGGCATCATGATGGGTCTGACCATCTTGTTCCGCGGGTCGTCTTGAGCGGTCACTCACGCCACATCAAGAAACTTGGACCATTATCGTGTTATCATTACCGCCGCTCCCACCTGCTCTTGATCGCCATCGAAACGGGTCCCGGCCGTACGATTAAGCTCCTTTGCAGCTACGGCGGCAAGAACATCCCACGCGCTACCGACGGCGGGCTCCGTTTCATCGGTGGCCACACCAGAGTCACCGTGGACCGTTCCATTTGCTTCTCAGATCCATTTTTTAGCATTGTTTCTCTCTCAATTTTAAACTTATTGGTAAAGGTAGGAGCGTTGTGCGGTTCGTCTGTGACGTTCTGGTGTCAATTGCCGAACGAAGACTTAGAAACCTTGATCTCCCTCACCAACGACGAAGATCTGACGAACATAAGCAAAGAATATGACCGCGCTTCGTCGAAACTACCTCATCCGTTGAATACCAGAGCCGTGTTGTTTCGGCCATAA 987 0.5137 MTACLSSLSAESSSTRAKRSNGFHNRSLRSGPVVLYCTQITPQSESITVHHPRGPSCSGIGAATIPPSTQSTIQKDSFELYVSGSPIWSNTLRCFPMFASVLSLLNLSEDSRTRQVVLAVLHLAAVFGETDYPQQGQSNKHLKEPYIIHFLTFATLYSRRPRRVGHHDGSDHLVPRVVLSGHSRHIKKLGPLSCYHYRRSHLLLIAIETGPGRTIKLLCSYGGKNIPRATDGGLRFIGGHTRVTVDRSICFSDPFFSIVSLSILNLLVKVGALCGSSVTFWCQLPNEDLETLISLTNDEDLTNISKEYDRASSKLPHPLNTRAVLFRP* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2610 328 PANTHER PB1 DOMAIN PROTEIN 213 328 - -
Amo16g2610 328 SMART PB1_new 229 324 IPR000270 GO:0005515
Amo16g2610 328 PANTHER OS05G0427100 PROTEIN-RELATED 213 328 - -
Amo16g2610 328 SUPERFAMILY CAD & PB1 domains 231 314 - -
Amo16g2610 328 Pfam PB1 domain 261 314 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2610 Amo-Chr16 115062436 115066546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2610 215 314 MAP Kinase Kinase Kinase AT1G04700 41.000 6.91e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2610 - - aip:107611558 197.208