Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2553 ATGGATTCCTTACTCCCACTTTTGTGTGGGAGGGCATTTCAGAGAAGAGAAGCAGTTAGGGTTTTSAGACAACTGCAATCCCTGCCATTCTCATACCCTTCCTCTGCTGCAAATTTCCGCGACCTACTTCCGCCGACGCGCCACGCCTCCGCCGCCGACGCACCCTGCCTCCGCCTCGCCCCGCTTCCGCCTCGCCCTGCTTCGGCCGCCGCGCCACGCCTCCCACGCTCAATAAGACAAGAGGTTTCTGCGGCCCTAAATCGCTCATCTGGTTCATCAGGTATACATCTTGATTTCATATTCCGAATCTTARATCCTTCCAAAGGTGTTCTTTTCTTTGGCCCTCCGGGCTGCGGCAAAACCCTGTTTACAAAAGCAATTGCAAATGAATTCCAGGCCAACTTCATAAGTGTTAGGGACCTGCATTGCTTCTGCAGTTGGCCTGGCATTCCAAAATCCACACGGTCCAAAATTCATAAATGGACTGAGTCATTTGTTGTCCTGGGAAAAAAGAAATCTCAGCTAACAAGGCTTTCTCATCATTTGCCTCCTGTGATGGGTGACAGATATCTGAGGTTGTCAATACTCAATTCCATGAAAGATCTGATAGATATCTGTCGGGAGCACAAAATTAGGGCAATTGGTAAATTTTAA 654 0.4878 MDSLLPLLCGRAFQRREAVRVXRQLQSLPFSYPSSAANFRDLLPPTRHASAADAPCLRLAPLPPRPASAAAPRLPRSIRQEVSAALNRSSGSSGIHLDFIFRILXPSKGVLFFGPPGCGKTLFTKAIANEFQANFISVRDLHCFCSWPGIPKSTRSKIHKWTESFVVLGKKKSQLTRLSHHLPPVMGDRYLRLSILNSMKDLIDICREHKIRAIGKF* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2553 217 PANTHER AAA-FAMILY ATPASE 104 150 - -
Amo16g2553 217 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D 104 150 - -
Amo16g2553 217 Gene3D - 99 149 IPR027417 -
Amo16g2553 217 CDD AAA 104 138 - -
Amo16g2553 217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 139 IPR027417 -
Amo16g2553 217 Pfam ATPase family associated with various cellular activities (AAA) 110 144 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2553 Amo-Chr16 110441029 110442465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2553 96 149 Calmodulin-binding Proteins AT3G56690 45.455 2.22e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2553 K13525 - ahf:114925624 276.559