Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo16g2548 | ATGATTATCGGAATTCATAGGAAATTGAGGTGGGATTTGGTAGATATGGGTAGCTTAAATGGAACACAGTTGAAATCTCAGCCAATCAACAATGCAAAGACTGGAAGCAGGCATTGGAGTGATCTGGTGGATCTTGATAATGGAGATATCATAACACTTGGAACAACATCAAAAGCAATTCATATTCCCTTTGGGATGGGTATGGCAACAGATCCAATGGCTTTGCGTCGAGGAGGCAAAAAGCTGCCTATGCAGGATGTTTGCTATTATGAATTGTCTCTGCCTGGGTTGGATCAGGATATTCCCTTTGGGATGGGTATGGCAACAGATCCAATGGCTTTGCGTCGAGGAGGCAGAAAGTTGCCTATGCAGGATGTTTGCTATTATGAATGGTCTCTGCCTGGGTTAGATCAACATATTCCATTTGGGATGGGTATGGCAACAGATCCAATGGCTTTGCGTCGAGGAGGCAAAAAGATGCCTATGCAGGATGTTTGCTATTATGAATGGTCTCTACCTGGGTTAGATCAGCATATTCCCTTTGGGATGGGTATGGCAACAGATCCAATGGCTTTGCGTCGAGGAGGCAGAAAGCTGCCTATGCAGGATGTTTGCTATTACGAATGGTCTCTGCCTAGGTTGGATCAGGTTCATATTACTAAGCAAAATTAG | 672 | 0.442 | MIIGIHRKLRWDLVDMGSLNGTQLKSQPINNAKTGSRHWSDLVDLDNGDIITLGTTSKAIHIPFGMGMATDPMALRRGGKKLPMQDVCYYELSLPGLDQDIPFGMGMATDPMALRRGGRKLPMQDVCYYEWSLPGLDQHIPFGMGMATDPMALRRGGKKMPMQDVCYYEWSLPGLDQHIPFGMGMATDPMALRRGGRKLPMQDVCYYEWSLPRLDQVHITKQN* | 224 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo16g2548 | 223 | PANTHER | PROTEIN PHOSPHATASE 2C | 145 | 182 | IPR015655 | GO:0004722|GO:0006470 | |
Amo16g2548 | 223 | SUPERFAMILY | SMAD/FHA domain | 9 | 62 | IPR008984 | GO:0005515 | |
Amo16g2548 | 223 | Pfam | FHA domain | 9 | 54 | IPR000253 | GO:0005515 | |
Amo16g2548 | 223 | PANTHER | PROTEIN PHOSPHATASE 2C 70 | 184 | 217 | - | - | |
Amo16g2548 | 223 | PANTHER | PROTEIN PHOSPHATASE 2C | 7 | 104 | IPR015655 | GO:0004722|GO:0006470 | |
Amo16g2548 | 223 | PANTHER | PROTEIN PHOSPHATASE 2C | 184 | 217 | IPR015655 | GO:0004722|GO:0006470 | |
Amo16g2548 | 223 | PANTHER | PROTEIN PHOSPHATASE 2C | 105 | 143 | IPR015655 | GO:0004722|GO:0006470 | |
Amo16g2548 | 223 | CDD | FHA | 2 | 62 | IPR000253 | GO:0005515 | |
Amo16g2548 | 223 | PANTHER | PROTEIN PHOSPHATASE 2C 70 | 145 | 182 | - | - | |
Amo16g2548 | 223 | PANTHER | PROTEIN PHOSPHATASE 2C 70 | 7 | 104 | - | - | |
Amo16g2548 | 223 | PANTHER | PROTEIN PHOSPHATASE 2C 70 | 105 | 143 | - | - | |
Amo16g2548 | 223 | Gene3D | - | 3 | 74 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo16g2548 | Amo-Chr16 | 109153713 | 109155796 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo16g2548 | 178 | 212 | PP2C-type Phosphatase Gene Family | AT5G19280 | 71.429 | 1.14e-12 | 64.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo16g2548 | K01090 | - | tcc:18602934 | 141.354 |