Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2511 ATGGGCAAAAAAATGAAGCTCCCCTCTCTTCTCAAGAACACTTCTGCTTCTTCTTCTTCTTCTTCTTGGGCTTGGCCTTCATGTCACCAACCAAAAACCCACTCTTTCAGAGCCACCAAAGAAATCTTCAAGACCTACTTCGACGCCACCGTCACCGCCATGGACACGCTACTTCTCAACACCTCCGAAGACTCCTTTTTCACCGTGTCTCCGGACTCCACCAGCTTCTCAACCACTTCCGACGACGACTACACACCGTCAACAAAAGACGACTCATCTCTCGAGACCGTCATTCGCGGCTTGCGCCACCGCTCCGACCGCCTGTTCTTCGATCCGGACGACGGCAGTTCCATCATAGAAGCAAAATCAGTAACCGCAACGGGAACGGCGGGAGCATCGTGGTCGTTGCCGTTGTTCAAGGACAGCGTGGCGTTGTCCATGGAGTCACGAGATCCTTACGTGGATTTCAGAAAGTCCATGGAAGAAATGGTGGAGGCTCATGGAGTGAAAGATTGGGAAGGTCTTGAGGCGCTTCTTGGTTGGTACTTGAAGGTTAATGGGAAGAGCAATCATGGATATATAGTTGGTGCTTTCGTTGATTTATTAGTCTCTCTTACACTTGCTTCATCTTCTTCTTCTTCTTCTACTACTACTACTACTACTTCAACATCCTCATCTTCTGATTCTCCTTCTTCTTCTTCTTCCTATTCTCCTTCTTCTCCTTTGTCCTTTTATAGTTCTTCACTCTCTTCCTCTTGTGTTTCTTGCTTGGAGGCTGAACAAGAACCACAAGAGGTTGATGATGGTGTTGATAATGATACTCCTCCTGCTTCTTCGTCTTCGTTGTTGGAGCATGATAAGGAGGAGATCAAATATGAAGATGTTGCTTCTTCTTCATCATCATCTTCCTCAAAAGTCTAA 921 0.4669 MGKKMKLPSLLKNTSASSSSSSWAWPSCHQPKTHSFRATKEIFKTYFDATVTAMDTLLLNTSEDSFFTVSPDSTSFSTTSDDDYTPSTKDDSSLETVIRGLRHRSDRLFFDPDDGSSIIEAKSVTATGTAGASWSLPLFKDSVALSMESRDPYVDFRKSMEEMVEAHGVKDWEGLEALLGWYLKVNGKSNHGYIVGAFVDLLVSLTLASSSSSSSTTTTTTSTSSSSDSPSSSSSYSPSSPLSFYSSSLSSSCVSCLEAEQEPQEVDDGVDNDTPPASSSSLLEHDKEEIKYEDVASSSSSSSSKV* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2511 306 MobiDBLite consensus disorder prediction 211 237 - -
Amo16g2511 306 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 5 251 IPR038933 GO:0045892
Amo16g2511 306 MobiDBLite consensus disorder prediction 256 306 - -
Amo16g2511 306 MobiDBLite consensus disorder prediction 10 31 - -
Amo16g2511 306 MobiDBLite consensus disorder prediction 71 91 - -
Amo16g2511 306 MobiDBLite consensus disorder prediction 1 31 - -
Amo16g2511 306 Pfam Transcriptional repressor, ovate 149 205 IPR006458 -
Amo16g2511 306 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 143 206 IPR006458 -
Amo16g2511 306 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 5 251 - -
Amo16g2511 306 ProSiteProfiles OVATE domain profile. 145 204 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2511 Amo-Chr16 107449088 107450268 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Amo16g2511 Ovate 8.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2511 - - ahf:112754577 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2511 16 107449088 107450268 Amo16g2511 16 107449088 107450268 ECH
Amo16g2511 16 107449088 107450268 Amo06g1811 06 64271706 64272871 hybridization