Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2489 ATGGCCTACTATGGTGTTTTGAGGTTTGTTATGGAAAATGGCGCCAAGGGATGCGAGGTCATCATTAGTGGCAAGTTGAGGGCTCAGCGCGCTAAATCCATGAAGTTCAAGGACGGGTACATGATTTTCTCAGGAGCATATGCATGTTGTCATCTTGGTGACGAGGATGTTTACGACAAAAAGGTTCATTATATAGAGGGTTTGGATCTAAAAACTAGCATATTTACCTTAAGGCAAATCAAAGCTGCAACAAACAACTTTAGTGTTTCCTGCAAGATTGGAGAAGGAGGGTTCGGGTATTTTCCAAATGGCATAGCAATAGCAGTTAAACAGCTTTCTTTTAGGTCGAAGCAGGGGAATTGTGAGTTCACAAATGAGATTGGCATGATTTCTGCTTTGCAACACCCGTGCCTAGTTAAGCTCTATGGCTGTTTTATGGAGGGAGATCAAATGTTGTTGATATATGAATATATGGAAAACAACAACCTTGCCAGTGCTCTGTGGGGTAATGTTTCTTTACTCTGTATATTTGAGTTTGACAAAGAGAAAACTCAATTGAAATTGGACTGGTCAACAAGGCGCAAGATTTGTATAGGCGTTGCTAAAGGCTTGGCTTACCTCCTTGGAGAGTCAAGATTAAAAATAGTTGATTAG 654 0.4067 MAYYGVLRFVMENGAKGCEVIISGKLRAQRAKSMKFKDGYMIFSGAYACCHLGDEDVYDKKVHYIEGLDLKTSIFTLRQIKAATNNFSVSCKIGEGGFGYFPNGIAIAVKQLSFRSKQGNCEFTNEIGMISALQHPCLVKLYGCFMEGDQMLLIYEYMENNNLASALWGNVSLLCIFEFDKEKTQLKLDWSTRRKICIGVAKGLAYLLGESRLKIVD* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2489 217 SUPERFAMILY Protein kinase-like (PK-like) 69 207 IPR011009 -
Amo16g2489 217 ProSiteProfiles Protein kinase domain profile. 87 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g2489 217 Gene3D Transferase(Phosphotransferase) domain 1 65 216 - -
Amo16g2489 217 Gene3D - 1 51 IPR036419 -
Amo16g2489 217 Pfam Ribosomal protein S3, C-terminal domain 2 43 IPR001351 GO:0003735|GO:0006412
Amo16g2489 217 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 56 216 - -
Amo16g2489 217 PANTHER BNAC01G36570D PROTEIN 56 216 - -
Amo16g2489 217 SUPERFAMILY Ribosomal protein S3 C-terminal domain 2 51 IPR036419 -
Amo16g2489 217 Pfam Protein tyrosine and serine/threonine kinase 103 208 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2489 Amo-Chr16 105661373 105663166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2489 51 216 Receptor kinase-like Gene Family AT1G53430 60.234 9.11e-58 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo16g2489 PK_Tyr_Ser-Thr 5.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2489 - - gmx:100786496 204.912