Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2474 ATCTCACTTCGCGTAGTCATGGTCTTCCCCGCAGTCACAGTTGCAATCGCCCTCTACGCAGGTACCATTGATGGTGTGGAGTATTATGGGAATGGAGAGACAAAGAAAGTGTCATGGAGAGAATCACAACTCAAAGGGTTGCGTCGTTTCCTCATTGAAAAAGAAGAAGATATTTTGAAGGCCTTAATGCTCGACTTAGGAAAGCATCAAGTTGAAGCTTTTAGAGGTGAGATAGGAACTTTGATGAAGTCTTTGAATTTTGCATTGAGTAACTTAAAATATTGGATATCAGGCAAAAAGGCTAAATTGTCACAAATAGCACTGCTTAGTAGTGCAGAAATTGTTTCTGAACCTCTGGGCCTAGTCCTCATTATTTCATCTTGGAATTTCCCCTTTGGTGAAGGGAGTTACAATTTAATTAATGATAGGTTTATCCTTGGAGCCACTAATAGGAGCAGTAGCAACTGGAAACACAGTGGTCTTAAAGCCTTCAGAGTTGTCACCAGCATGTTAGTCCAAAAAATCAATGTCTCAATTGGGCAAGACCCAGAGTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTAAGAATAACAGATATTTGACAACTTCAACTATCACTTTTTCTCATAACATGCATTCCAACATGGATAATGTCCTGCAGCATGTGTTTAAGATGGAACAAGAGAGATATACAAAAGAAGGGATTGACTGGAGCTACTTAGAATTTGTGGATAATCAAGATGTACTTGATCTAATTGAAAAGAAACCAGGTGGAATCATTGCTCTTCTTGATGAAGCTTGCTATGAAAAAGTGGACCAATATGCTGCTACAAATGCAAAGAGTACATAA 867 0.3864 ISLRVVMVFPAVTVAIALYAGTIDGVEYYGNGETKKVSWRESQLKGLRRFLIEKEEDILKALMLDLGKHQVEAFRGEIGTLMKSLNFALSNLKYWISGKKAKLSQIALLSSAEIVSEPLGLVLIISSWNFPFGEGSYNLINDRFILGATNRSSSNWKHSGLKAFRVVTSMLVQKINVSIGQDPESKCLIGVLDIYGFESFKNNRYLTTSTITFSHNMHSNMDNVLQHVFKMEQERYTKEGIDWSYLEFVDNQDVLDLIEKKPGGIIALLDEACYEKVDQYAATNAKST* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2474 288 PRINTS Myosin heavy chain signature 188 216 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g2474 288 PRINTS Myosin heavy chain signature 244 272 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g2474 288 Gene3D Myosin VI head, motor domain, U50 subdomain 166 178 - -
Amo16g2474 288 PANTHER ALDEHYDE DEHYDROGENASE 27 140 IPR012394 GO:0006081
Amo16g2474 288 Gene3D Kinesin motor domain 179 199 IPR036961 -
Amo16g2474 288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 276 IPR027417 -
Amo16g2474 288 Pfam Aldehyde dehydrogenase family 37 132 IPR015590 GO:0016491
Amo16g2474 288 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 29 132 IPR016162 GO:0016491
Amo16g2474 288 PANTHER ALDEHYDE DEHYDROGENASE 27 140 - -
Amo16g2474 288 Pfam Myosin head (motor domain) 166 274 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g2474 288 Gene3D - 200 278 - -
Amo16g2474 288 SUPERFAMILY ALDH-like 34 132 IPR016161 GO:0016491
Amo16g2474 288 ProSiteProfiles Myosin motor domain profile. 1 288 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2474 Amo-Chr16 104971102 104973884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2474 171 273 Myosins gene family AT1G54560 71.845 1.48e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2474 - - aip:107647086 212.616