Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2438 ATGGTGTTTCACCATCACAGAAAACTCATGCCAGAAATCTGCGAGTCCCTCTGCCACATGGTGCAGAATTGTTCTTCAAATTGTGATGATTGCCTCAAAATCTACATCACCAACCCCCAATACTACTATTATTCCCAACCACTGCCACCGCCACTGCCACTGATTCCTCCTCTCCCCTTAGATGATACATCAGACCATGGAAAAAGCCAGGCTCTCTCGCCCTACTTGGATAATATGCGTGATGATTTCTTCGTTGATGAGGAGCACGGTCCTGTGGTGGACCACCCGATCTGCTCTTCGAGCTTGTCAAAAAACTTCCATGAGATGGATTCATCATCTGAAGATGAGGATCAGGAAACTCATCAATGTGGTTCTGGCAGTTCCAAAGATAAAATTCCTCTTCCTGAAGGTGTTGTGGAATCTTTAATGAATGGCCAACTGAATTTGCCTTTCTCTAAGGAGTTCTCGTTGCCATCGGCGGTTCCATGCCTGGGCGGCTGTGGAGAAGCTTACTACTGCAGCCTCTACATGTTGGGTTTCTTGGAGATAAGAGAGGTAACACAATTGATGTTCACTGGTACAAACAGAAGCAAAATCTTCACCATGTATATTGACTATCTGTTTTTGGGAGATTGTGTTGATAGAGGACAGCACAGCTTGGAAACCATTACCTTGCTGCTTGCACTTAAGATTGAGTATCCTGAGAATGTTCACCTGATATGTGGTAACCATGAAGCTGCTGACATAAATGCACTATTTGGTTTTCGTATTGAGTACATTGAAAGAATGGTATGGATGGATGAAACATGGATGCAGGTGAATCCTAAGGAGTTGAATCCATATCTGAAGGACAATGGAAGTGGCTACCCAGAAGAAAGTGATAGGACTAAAGTTGGTTTAGACCAACTTTTATCTGCTTCCCTTATTGGGGATGGAGGAGCAAGTTGGAGACTTAAAGCTTTAAAGCGTGCACGAGAAGCAGCTCGAGAAGGGCGTAGCTTTCAGGAGGGTTTTTTTACTTACTTTCCAGATATTGTTCATTTGTTTCATGCTATAGTTATTTATAAAAGGAACTTCTCTCAAGAGCTTCAAAAGCTTGAGGAGTATCGCATGAACCAGAAATCCATTGATTCAATGGGTGATTACATCAAAGAAGGCCAAGTAATAGGGTATCTGGATCAGTTTGGTACTTCACTTCCTGTTAAGGTGGTAGAACTTATGGCAGTCATGGCCAAGAACCCTGATCTTGCATATTGTAAAATAGTAGAGGTAGTAACAGAGACAACTGCGCCGCTAACTCCCACGGAGGAGCTTCTTGCAAAGATATCATCTCAAAGACCTTACATTTCTTCACCAAAGAAACCGAATGCTGCAACCATCAGTGATCCGGCTCCCTCGAAACCTGCCATTGCCACAGCCACTGAGAAGGAAACTGCACAACCAAAACTGGTTGCGAAACAGTCACTTTCGCCTTATACTGTGTAA 1485 0.435 MVFHHHRKLMPEICESLCHMVQNCSSNCDDCLKIYITNPQYYYYSQPLPPPLPLIPPLPLDDTSDHGKSQALSPYLDNMRDDFFVDEEHGPVVDHPICSSSLSKNFHEMDSSSEDEDQETHQCGSGSSKDKIPLPEGVVESLMNGQLNLPFSKEFSLPSAVPCLGGCGEAYYCSLYMLGFLEIREVTQLMFTGTNRSKIFTMYIDYLFLGDCVDRGQHSLETITLLLALKIEYPENVHLICGNHEAADINALFGFRIEYIERMVWMDETWMQVNPKELNPYLKDNGSGYPEESDRTKVGLDQLLSASLIGDGGASWRLKALKRAREAAREGRSFQEGFFTYFPDIVHLFHAIVIYKRNFSQELQKLEEYRMNQKSIDSMGDYIKEGQVIGYLDQFGTSLPVKVVELMAVMAKNPDLAYCKIVEVVTETTAPLTPTEELLAKISSQRPYISSPKKPNAATISDPAPSKPAIATATEKETAQPKLVAKQSLSPYTV* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2438 494 SUPERFAMILY Metallo-dependent phosphatases 205 263 IPR029052 -
Amo16g2438 494 PRINTS Serine/threonine phosphatase family signature 239 263 IPR006186 GO:0016787
Amo16g2438 494 PRINTS Serine/threonine phosphatase family signature 206 233 IPR006186 GO:0016787
Amo16g2438 494 MobiDBLite consensus disorder prediction 108 124 - -
Amo16g2438 494 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 202 273 - -
Amo16g2438 494 MobiDBLite consensus disorder prediction 105 132 - -
Amo16g2438 494 Gene3D - 185 278 IPR029052 -
Amo16g2438 494 MobiDBLite consensus disorder prediction 447 494 - -
Amo16g2438 494 Pfam Calcineurin-like phosphoesterase 206 288 IPR004843 GO:0016787
Amo16g2438 494 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL1-RELATED 202 273 - -
Amo16g2438 494 SMART pp2a_7 134 375 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2438 Amo-Chr16 103257687 103262197 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2438 206 262 Calmodulin-binding Proteins AT5G63870 42.105 1.58e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2438 K01090 - aip:110264040 162.155