Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2407 TGCGTTTTTGAAACACAGAACAGAACATTGCCCTTTAGGTCCCCACCCCCCACTCAACCAATTCACGATCCAGATTCAGCCACGTCAACTAATAGACACGATGCATCAAACCTCCCTCAGACCTCAACTCAATGCCTCATTCTTCTTCTTCCTCAACCCTCAATCCTCTGCCCTCACCCTCTTCTCCACTGTCTCGCGCTCACTGCCCGGACTCATCTCCTCCCAGCCACGCGCGATTCGCCAGCGTCACCTCCTCCTTGCTGCTTCGCCGGTTCGTCCTCGCCCATCTCCACCAGTCCTCCTCCATCCGCGAATCGCCGGCGTGACCAGAAGCTCCAGGCTCCTCCTCCTCTGCAGTCTGCTTCGCGCCTCCATTGCTCCTCGATGGAAACTAGTGAGGAACAAAAGTATGGAGTGCGAAGACTGGAGATGTCTGACAAGGGCAAAGGTTTCATAGAGCTACTGCAACAACTTAGTGTTTGTGATTCTGTCTCTGACAAGGAGTTTGAGGATAGATTCCGAGAGCTCAGTTCCCTCGGAGACGACCATGTTATCTGCGTCATTGAAGACCATGTTTCCAAGAAGATTATCGCGACGGGGAGCGTGTTCATCGAGAAGAAGTTTCTGAGAAACTGTGGCAAGGTTGGTCACATTGAGGACGTTGTTGTGGATTCCAGCACTCGTGGGAAGCAACTGGGAAAGAAGATAATCAACTTCCTAACGGATCATGCTCGTTCAATGGGCTGCTACAAGGTCATTCTTGATTGCAGCATTGAAAACAAACTCTTCTATGAGAAGTGTGGCTTCAAGCAGAAAGAAATTCAGATGGTTAGGTATTTCGTTTGA 846 0.5035 CVFETQNRTLPFRSPPPTQPIHDPDSATSTNRHDASNLPQTSTQCLILLLPQPSILCPHPLLHCLALTARTHLLPATRDSPASPPPCCFAGSSSPISTSPPPSANRRRDQKLQAPPPLQSASRLHCSSMETSEEQKYGVRRLEMSDKGKGFIELLQQLSVCDSVSDKEFEDRFRELSSLGDDHVICVIEDHVSKKIIATGSVFIEKKFLRNCGKVGHIEDVVVDSSTRGKQLGKKIINFLTDHARSMGCYKVILDCSIENKLFYEKCGFKQKEIQMVRYFV* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2407 281 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 137 281 IPR000182 GO:0016407
Amo16g2407 281 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 140 279 IPR016181 -
Amo16g2407 281 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 125 277 IPR039143 GO:0004343|GO:0006048
Amo16g2407 281 MobiDBLite consensus disorder prediction 77 132 - -
Amo16g2407 281 MobiDBLite consensus disorder prediction 23 37 - -
Amo16g2407 281 MobiDBLite consensus disorder prediction 90 106 - -
Amo16g2407 281 MobiDBLite consensus disorder prediction 1 37 - -
Amo16g2407 281 Gene3D - 120 277 - -
Amo16g2407 281 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 125 277 - -
Amo16g2407 281 MobiDBLite consensus disorder prediction 115 132 - -
Amo16g2407 281 CDD NAT_SF 187 255 - -
Amo16g2407 281 Pfam Acetyltransferase (GNAT) family 166 269 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2407 Amo-Chr16 101898826 101902074 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo16g2407 Acetyltransf_1 4.1e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2407 K00621 - gmx:100499668 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2407 16 101898826 101902074 Amo16g2407 16 101898826 101902074 ECH