Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2397 ATGTCAGGGAAGGTTTTTGTTGTGGCTGCCCTTTCACTCATTCCACTGGTGCCAGGACATCTTTCTAATAGGACTTATCGACTTTCTTTTTTGGGTACCACGTGCTCTTCTCTGTTTTCCTTGTACTCATTATACGGAGGTGGAGTGGTGCTTCTTTATGCTTCTAAATATGATGATGTTAAATTAGTTGTCAACATCTCTGGACGCTATGATCTGAAGACAGGAGTTGAAGATAAACTTGGAAAAGATTATATGGAAAGAATCAAGAAGGACGGTTTCATTGACGTGAAGAATAGGTCAGTAAGTTTTAATTACCGTGTGGCGGAGGAAAGTTTGATGGATCGCTTAGCTCAGCAGGGAAAGCTTTCTGAAAATGATTCTAGGCGCTACTTTCAACAACTTATAGATGATGTTGCTCATTGGAAGAGGACACTACTTTAA 441 0.4014 MSGKVFVVAALSLIPLVPGHLSNRTYRLSFLGTTCSSLFSLYSLYGGGVVLLYASKYDDVKLVVNISGRYDLKTGVEDKLGKDYMERIKKDGFIDVKNRSVSFNYRVAEESLMDRLAQQGKLSENDSRRYFQQLIDDVAHWKRTLL* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2397 146 Gene3D alpha/beta hydrolase 43 145 IPR029058 -
Amo16g2397 146 PANTHER HYDROLASE, PUTATIVE-RELATED 46 118 - -
Amo16g2397 146 PANTHER RE40534P-RELATED 46 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2397 Amo-Chr16 101656200 101658420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2397 111 140 CBL-interacting serine-threonine protein kinases AT5G35410 56.667 1.62e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2397 - K06889 gmx:100783246 112.464