Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2352 ATGTTCTTTTGCTACTATTACTTTTGTATGTTAACATTTTGCTGTGTTGTTCTCACTGAAACTGACCCTTCAGATGTAAAGGTTCTAAACCAGTTCAGAAACGGTCTCAAGAACCCTGAGCTCTTACCATGGCCTGAAAATGGTGGAGACCCATGTGGAAACCCTCCATGGAAGTACATCTTCTGCAATGGCAAAAGGGTATCTCAGATTCAAGCTAAAAACTTGAACTTGATTGGTCCTTTGCCTCAAAGCTTCAACCAGCTCACAATGCTTGAGAATCTTGGTCTTCAGAACAACAAGCTCAATGGCCCTTTACCTTCTTTCATTGGTTTGAAGATGTTAAAGTTTGCATTTTTGAACCACAATGAGTTTGATTCAATCCCTTATGATTTTTTGAAGGACTTGAGATCTTGA 414 0.3937 MFFCYYYFCMLTFCCVVLTETDPSDVKVLNQFRNGLKNPELLPWPENGGDPCGNPPWKYIFCNGKRVSQIQAKNLNLIGPLPQSFNQLTMLENLGLQNNKLNGPLPSFIGLKMLKFAFLNHNEFDSIPYDFLKDLRS* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2352 137 Gene3D Ribonuclease Inhibitor 22 137 IPR032675 -
Amo16g2352 137 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Amo16g2352 137 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 9 136 - -
Amo16g2352 137 SUPERFAMILY L domain-like 21 133 - -
Amo16g2352 137 PANTHER OSJNBA0070M12.3 PROTEIN 9 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2352 Amo-Chr16 99361915 99362482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2352 2 128 Strubbelig Receptor Gene Family AT2G20850 32.812 1.81e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2352 - - gmx:100781857 201.06