Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2349 ATGGGATTAGAGTCACAACTTGATTCTCTGGAAGTCATAATCAAGGACCTTCAAGCAGAGACCATGTTTTTCGGAGGGTCTTGTGGAGATAAGGGAAGACTTATAGAAGGTTCTTACAAAGGAAAAACTAAATCAGGTATGTTCATGCATCTTTTTATTGATGCATTGGCTCCGGCAAAACTTGAAGGAATTCTCATGAGCCACCCTTCCATTGAAGATGCAGCTGTTGTTCTGCAAAAAGATGATGTAGCTGGTGAAGTTCCAGTTGCTTTTGTGGTGAGGTCATCAAATGATCCTATTACTGAAGATGCTGTCAAGGACTTTATAGCTAAACAGGTAGTATTTTACAAGAGGCTATATAAAGTAATTTTCATTGACGCAATTCCAAAATCTTCAATTGGCAAGATATTAAGAAAAGAACTCAAGGTACAAGAACTAGAATTGGAACTTTCATGA 456 0.3772 MGLESQLDSLEVIIKDLQAETMFFGGSCGDKGRLIEGSYKGKTKSGMFMHLFIDALAPAKLEGILMSHPSIEDAAVVLQKDDVAGEVPVAFVVRSSNDPITEDAVKDFIAKQVVFYKRLYKVIFIDAIPKSSIGKILRKELKVQELELELS* 152
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2349 151 PANTHER 4-COUMARATE--COA LIGASE 2 56 144 - -
Amo16g2349 151 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 56 144 - -
Amo16g2349 151 SUPERFAMILY Acetyl-CoA synthetase-like 57 145 - -
Amo16g2349 151 Gene3D - 53 147 IPR045851 -
Amo16g2349 151 Pfam AMP-binding enzyme C-terminal domain 60 135 IPR025110 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo16g2349 Amo-Chr16 98969827 98973982 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2349 56 147 Monolignol Biosynthesis Gene Families AT4G05160 59.783 2.23e-28 107
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2349 K01904 - adu:110272335 202.601