Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2347 ATGATGGACTTATCACTACACAAGCAACTCTTCCCCCTCCTCTCTCTTCTCTTAATTCTATTTCTTTCAGGACAAAGGATGCAAGCAGAGGCTAATAATAGCCTTCAAAATCCCCAACTCTGTGAACCAACCAAGAAACTCTTCGTTTTTGGAGACTCATATGCTGACACCGGCAACATCAGAAAAAGTCTCTCCAATTCATGGAAAGACCCCTACGGCATCACCTTTCCCGGCAAGCCAGCCGGTCGATTCTCCGACGGAAGGGTCCTCACCGACTACATTGCTAAGTACCTGGGAGTGAAAACACCTGTGCCATACAGATTTCGGAAGCAAATGGCGCAGCAGCTGAAGTACGGCATGAACTTTGCAGTGGGTGGAACTGGCGTATTTGACACGTCTACTCCAGGGCCCAACATGACCACGCAGATCCAATTGTTGGAGCAACTCATCCACGACGGACTCTACATAGCTTCTGATCTCACCAACTCCATCGCTCTTGTCTCTGTTGCTGGTAACGACTATAGTCACTACCTCGCCACTCATGCCTCTCCTCAGGGTCTACCATATTTCGTGGCGTCAGTGGTGAATCAAACAACAAGGAATCTGATGCGGATCAAAGCATTGGGGATAAAGAAGATCATAGTTGGCAGCCTCCAACCCCTTGGATGCCTCCCTCAGGTCACAGCCTTCTCGTCCTTCCAACAATGCAACGCCTCTTCCAACACCTTGGTGGCTTTCCACAACAACCTCTTGAACCAAGCAGTTACCAATTTGAACCAATCGTGGTCGTCGTCCTTCGCGGTTCTCAACCTCTACGACAGCTTCATGTCCGTCCTAAACCACCCTACGACGCACAACATCCAGAACCAGTTGCGGCCGTGCTGCGTTGGCGTAAACAGCAAGTATTCATGTGGGAGTGTGGATGAGAATAACGTGAAGATGTATAGGGTTTGCGACGATCCCAAATCAGCCTTCTTTTGGGATCTGGTGCACCCCACGCAGGCCGGGTGGCATGCCGTGTATAACAAGTTAAGAACCATGAATGCTCTTCAAGGAATTCAGTTCTAG 1068 0.4953 MMDLSLHKQLFPLLSLLLILFLSGQRMQAEANNSLQNPQLCEPTKKLFVFGDSYADTGNIRKSLSNSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLGVKTPVPYRFRKQMAQQLKYGMNFAVGGTGVFDTSTPGPNMTTQIQLLEQLIHDGLYIASDLTNSIALVSVAGNDYSHYLATHASPQGLPYFVASVVNQTTRNLMRIKALGIKKIIVGSLQPLGCLPQVTAFSSFQQCNASSNTLVAFHNNLLNQAVTNLNQSWSSSFAVLNLYDSFMSVLNHPTTHNIQNQLRPCCVGVNSKYSCGSVDENNVKMYRVCDDPKSAFFWDLVHPTQAGWHAVYNKLRTMNALQGIQF* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2347 355 Pfam GDSL-like Lipase/Acylhydrolase 47 343 IPR001087 GO:0016788
Amo16g2347 355 Gene3D SGNH hydrolase 39 351 IPR036514 -
Amo16g2347 355 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 354 - -
Amo16g2347 355 CDD SGNH_plant_lipase_like 47 344 IPR035669 -
Amo16g2347 355 PANTHER OSJNBB0059K02.9 PROTEIN 6 354 - -
Amo16g2347 355 SUPERFAMILY SGNH hydrolase 44 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2347 Amo-Chr16 98953859 98966748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2347 13 340 Pollen Coat Proteome AT1G75930 26.496 2.04e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2347 - - gmx:100788092 508.834