Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2346 ATGATGGACTTATCACTACACAAGCAACTCTTCCCCCTCCTCTCTCTTCTCTTAATTCTATTTCTCTCAGGACAAAGGATGCAAGCAGATGCTAATAGCCTTCAAAATCCCCAACTCAGTGAACCAACCAAGAAACTCTTCGTTTTTGGAGACTCATATGCTGACACCGGCAACATCAGAAAAAGTCTCTCCAATTCATGGAAAGACCCCTACGGCATCACCTTTCCCGGCAAGCCAGCCGGTCGATTCTCCGATGGAAGGGTCCTCACCGACTACATTGCTAAGTACCTGGGAGTGAAAACACCTGTGCCATACAGATTTCGGAAGCAAATGGCGCAGCAGCTGAAGTACGGCATGAACTTTGCAGTGGGTGGAACTGGCGTATTTGACACGTCTACTCCAGGGCCCAACATGACCACGCAGATCCAATTGTTGGAGCAACTCATCCACGACGGACTCTACATAGCTTCTGATCTCACCAACTCCATCGCTCTTGTCTCTGTTGCTGGTAACGACTATAGTCACTACCTCGCCACTCATGCCTCTCCTCAGGGTCTACCATATTTCGTGGCGTCAGTGGTGAATCAAACAACAAGGAATCTGATGCGGATCAAAGCATTGGGGATAAAGAAGATCATAGTTGGCAGCCTCCAACCCCTTGGATGCCTACCTCAGGTCACAGCCTTCTCGTCCTTCCAACAATGCAACGCCTCTTCCAACACCTTGGTGGCTTTCCACAACAACCTCTTGAACCAAGCAGTTACCAATTTGAACCAATCGTGGTCGTCGTCCTTCGCGGTTCTCAATCTCTACGACAGCTTCATGTCCGTCCTAAACCACCCTACAACGCACAACATCCAGAACCAGTTGCGGCCGTGCTGCGTTGGGGTAAACAGCAAGTATTCATGTGGGAGTGTGGATGAGAATAACGTGAAGATGTATAGGGTTTGCAACGATCCCAAATCCGCCTTCTTTTGGGATCTGGTGCACCCCACGCAGGCCGGGTGGCATGCCGTGTATAACAAGTTAAGAACCATGAATGCTCTTCAAGGAATTCAGTTCTAG 1065 0.493 MMDLSLHKQLFPLLSLLLILFLSGQRMQADANSLQNPQLSEPTKKLFVFGDSYADTGNIRKSLSNSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLGVKTPVPYRFRKQMAQQLKYGMNFAVGGTGVFDTSTPGPNMTTQIQLLEQLIHDGLYIASDLTNSIALVSVAGNDYSHYLATHASPQGLPYFVASVVNQTTRNLMRIKALGIKKIIVGSLQPLGCLPQVTAFSSFQQCNASSNTLVAFHNNLLNQAVTNLNQSWSSSFAVLNLYDSFMSVLNHPTTHNIQNQLRPCCVGVNSKYSCGSVDENNVKMYRVCNDPKSAFFWDLVHPTQAGWHAVYNKLRTMNALQGIQF* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2346 354 Pfam GDSL-like Lipase/Acylhydrolase 46 342 IPR001087 GO:0016788
Amo16g2346 354 Gene3D SGNH hydrolase 33 350 IPR036514 -
Amo16g2346 354 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 353 - -
Amo16g2346 354 PANTHER OSJNBB0059K02.9 PROTEIN 6 353 - -
Amo16g2346 354 SUPERFAMILY SGNH hydrolase 42 343 - -
Amo16g2346 354 CDD SGNH_plant_lipase_like 46 343 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2346 Amo-Chr16 98933435 98946000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2346 46 339 Pollen Coat Proteome AT1G75930 26.183 5.98e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2346 - - gmx:100788092 506.523