Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2343 ATGGGTCCATTGTCGAATCCTAACCTCCAATTTCAACCAACCATTGGGGGTAGTACCATTGGATCCACCATGCCATTAGAATCTTCGGGGATTTTGTCTCAATGTGTCAATGTTGGTGCCCCTTCTAGAGCTCCTCCCGGAGAACCGGTCAAAAAGAAGAGGGGTATGCCTAGGAAGTATGGGCCGGATGGAACCGTTTCACTGGCATTGACTCCAACGCCAGCTACTCATCCGAGAACCATGACACAACAAGGCCAAAAACAGGGTAGAAGTCGCCCCCCAGGGTCTAGGAAGAAACAGCAGCTGGCTTCTCTTGAAAAGAGCAAGGAATTGGCCACTTGCCAGGGTCAAATCAAGACCTTCAAGTTAACTGAGGCTCAAAAGGATAACGCCATAGAAGAGTTGAGAAATGCAGTTAATAAACTGGAGGAAAGGCTTAGAGTTACTGAGGATCATCTCAAACAGAAGAATCTAGAAATCAAAAAACTGACAGATGAAAAGAAATGTGCATTGGCTACACAATATGCGGCAGGAGCAACTCTTAAAAGGGTATATGCAAATCAAAAGGATGATGATTCTCTCCGAATTGACAGCATCATTGCTCCATTTGAAGCTGAGATTAAAATATAA 630 0.446 MGPLSNPNLQFQPTIGGSTIGSTMPLESSGILSQCVNVGAPSRAPPGEPVKKKRGMPRKYGPDGTVSLALTPTPATHPRTMTQQGQKQGRSRPPGSRKKQQLASLEKSKELATCQGQIKTFKLTEAQKDNAIEELRNAVNKLEERLRVTEDHLKQKNLEIKKLTDEKKCALATQYAAGATLKRVYANQKDDDSLRIDSIIAPFEAEIKI* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2343 209 MobiDBLite consensus disorder prediction 69 98 - -
Amo16g2343 209 MobiDBLite consensus disorder prediction 1 36 - -
Amo16g2343 209 Pfam Microtubule-associated protein 70 106 208 IPR009768 GO:0007010|GO:0008017
Amo16g2343 209 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 105 208 IPR009768 GO:0007010|GO:0008017
Amo16g2343 209 MobiDBLite consensus disorder prediction 1 101 - -
Amo16g2343 209 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-5 105 208 - -
Amo16g2343 209 Coils Coil 121 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2343 Amo-Chr16 98904669 98906259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2343 50 105 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 54.386 3.08e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2343 - - lja:Lj1g3v2635090.1 158.303