Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2339 ATGGAGGCAAGCTCAGTCGTAGAAGACGATGAACGTGTTATCCTTGTTTGCACAGACCCCGATTCTCTCGAACCTCAAACTCCAGACCAAGAACACCTTCTCCTCACCGCCACAGATATCCTCACCTGGGACTTGCCTAACATCCTCACTTTCAACACCCTCAAAGTTCAAGCACATCGCTCCAGGCTCATTGAGCAATCCTCGTATTTCCGTGGTCTACTCGGCCGGAGTTTCAGTGAATCGTGCTTGAGCTCAATCACTGTTAAATGGGATATCGGTGTATTTATCCAGATTCTGAAGCATATCTATGATTGTTCATTGGATGTTACTTCTGAGAATTTCCTCCCCCTTTATGAGGGTGCGTTCTATTTTGGAGTGGAAACACTGATATTGAAGTGTGAGTCTTGGTTTTCTGAGGTATCCTCACCTGAAGGCTTTCAGTCAGCGCAATTGCCAATGGAGGACATGATCCAAATTTGGAAGTTTGGCTTAGAGCATGCTAGTGACTTTATTGTGAACTTGTGTGTGGGCTGCCTGGCAAGAAATTTTATGTGGGCAAAGCACAACATGTTTTTCAAGAGAATCCCGCATGAACTGCTGTTGTCTTCAGTTAAGCATCCACACTTGACTGTTGACAGGTTGATTTAG 648 0.4506 MEASSVVEDDERVILVCTDPDSLEPQTPDQEHLLLTATDILTWDLPNILTFNTLKVQAHRSRLIEQSSYFRGLLGRSFSESCLSSITVKWDIGVFIQILKHIYDCSLDVTSENFLPLYEGAFYFGVETLILKCESWFSEVSSPEGFQSAQLPMEDMIQIWKFGLEHASDFIVNLCVGCLARNFMWAKHNMFFKRIPHELLLSSVKHPHLTVDRLI* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2339 215 Pfam BTB/POZ domain 51 136 IPR000210 GO:0005515
Amo16g2339 215 ProSiteProfiles BTB domain profile. 45 111 IPR000210 GO:0005515
Amo16g2339 215 SUPERFAMILY POZ domain 49 137 IPR011333 -
Amo16g2339 215 SMART BTB_4 11 141 IPR000210 GO:0005515
Amo16g2339 215 CDD BTB_POZ_ZBTB_KLHL-like 48 124 - -
Amo16g2339 215 Gene3D Potassium Channel Kv1.1; Chain A 47 187 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2339 Amo-Chr16 98655443 98657462 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Amo16g2339 BTB 3.6e-07 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2339 - - adu:107493902 432.95